RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 ZNF296Q8WUU4 475 aaPredicted RBP14.07□□□□□ -0.16
LINC00339-213ENST00000642137 ANO3Q9BYT9 981 aa14.07□□□□□ -0.16
LINC00339-213ENST00000642137 ADD3Q9UEY8 706 aaKnown RBP14.07□□□□□ -0.16
LINC00339-213ENST00000642137 SOWAHBA6NEL2 793 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 F13A1P00488 732 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 PGK2P07205 417 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 CYP3A4P08684 503 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 HOXC6P09630 235 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 USP11P51784 963 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 CNTN2Q02246 1040 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 RESTQ13127 1097 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 EARS2Q5JPH6 523 aaKnown RBP14.06□□□□□ -0.16
LINC00339-213ENST00000642137 ARHGEF16Q5VV41 709 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 PIK3AP1Q6ZUJ8 805 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 ZNF467Q7Z7K2 595 aaPredicted RBP14.06□□□□□ -0.16
LINC00339-213ENST00000642137 CD99L2Q8TCZ2 262 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 TBCKQ8TEA7 893 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 SOCS4Q8WXH5 440 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 IWS1Q96ST2 819 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 RMDN3Q96TC7 470 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 ARHGAP39Q9C0H5 1083 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 PXMP2Q9NR77 195 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 RPTORQ8N122 1335 aa14.06□□□□□ -0.16
LINC00339-213ENST00000642137 SREBF1P36956 1147 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 RGS2P41220 211 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 TRAPPC10P48553 1259 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 ALDH5A1P51649 535 aaPredicted RBP14.05□□□□□ -0.16
LINC00339-213ENST00000642137 XRRA1Q6P2D8 792 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 CRYGNQ8WXF5 182 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 PGBD1Q96JS3 809 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 PURBQ96QR8 312 aaKnown RBP14.05□□□□□ -0.16
LINC00339-213ENST00000642137 MPHOSPH6Q99547 160 aaKnown RBP14.05□□□□□ -0.16
LINC00339-213ENST00000642137 PDCD2LQ9BRP1 358 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 ZNF236Q9UL36 1845 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 FRMPD4Q14CM0 1322 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 PLXNA1Q9UIW2 1896 aa14.05□□□□□ -0.16
LINC00339-213ENST00000642137 MYH7BA7E2Y1 1941 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 LCTP09848 1927 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 ASB14A6NK59 587 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 ECM2O94769 699 aaPredicted RBP14.04□□□□□ -0.16
LINC00339-213ENST00000642137 NR3C2P08235 984 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 XRCC5P13010 732 aaKnown RBP14.04□□□□□ -0.16
LINC00339-213ENST00000642137 PRMT2P55345 433 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 ARHGAP4P98171 946 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 PGM5Q15124 567 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 INF2Q27J81 1249 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 RILPL1Q5EBL4 403 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 PCNX4Q63HM2 1172 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 MAMDC4Q6UXC1 1216 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 VSIG10LQ86VR7 867 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 MSL3Q8N5Y2 521 aaKnown RBP14.04□□□□□ -0.16
LINC00339-213ENST00000642137 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 MORC4Q8TE76 937 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 FGD4Q96M96 766 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 NAP1L4Q99733 375 aaKnown RBP14.04□□□□□ -0.16
LINC00339-213ENST00000642137 TSKSQ9UJT2 592 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 NOL7Q9UMY1 257 aaKnown RBP14.04□□□□□ -0.16
LINC00339-213ENST00000642137 ATP6V1DQ9Y5K8 247 aa14.04□□□□□ -0.16
LINC00339-213ENST00000642137 CYP3A7-CYP3A51PA0A087WV96 503 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 EDIL3O43854 480 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 STAM2O75886 525 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
LINC00339-213ENST00000642137 CYP2B6P20813 491 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 CYP3A7P24462 503 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 EDNRBP24530 442 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 CIITAP33076 1130 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 CAP1Q01518 475 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 STXBP2Q15833 593 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 FOXD4L5Q5VV16 416 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-213ENST00000642137 MYSM1Q5VVJ2 828 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 MOXD1Q6UVY6 613 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 FOXD4L4Q8WXT5 416 aaPredicted RBP14.03□□□□□ -0.16
LINC00339-213ENST00000642137 MAML3Q96JK9 1138 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 SRRDQ9UH36 339 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 GABRQQ9UN88 632 aa14.03□□□□□ -0.16
LINC00339-213ENST00000642137 ASTN1O14525 1302 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 CCND2P30279 289 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 FLT3LGP49771 235 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 TOB1P50616 345 aaPredicted RBP14.02□□□□□ -0.17
LINC00339-213ENST00000642137 IRF5Q13568 498 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 ATL3Q6DD88 541 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 PPP4R3AQ6IN85 833 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 TRMT44Q8IYL2 757 aaKnown RBP14.02□□□□□ -0.17
LINC00339-213ENST00000642137 APBA2Q99767 749 aa14.02□□□□□ -0.17
LINC00339-213ENST00000642137 SYNGAP1Q96PV0 1343 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 FOXN1O15353 648 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 MAFGO15525 162 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 EIF3JO75822 258 aaKnown RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 IGHA2P01877 340 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 MYCLP12524 364 aaPredicted RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 GCFC2P16383 781 aaKnown RBP14.01□□□□□ -0.17
LINC00339-213ENST00000642137 ZNF76P36508 570 aa14.01□□□□□ -0.17
LINC00339-213ENST00000642137 CTCFP49711 727 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms