RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 ZNF536O15090 1300 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 ELP1O95163 1332 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 MCM3APO60318 1980 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 MYH4Q9Y623 1939 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 ZBTB43O43298 467 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 TRAK2O60296 914 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 CTDNEP1O95476 244 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 ASGR1P07306 291 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 C6orf222P0C671 652 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 FOSL2P15408 326 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 METAP2P50579 478 aaKnown RBP eCLIP13.73□□□□□ -0.218e-9■■■□□ 16.8
ERGIC3-220ENST00000640748 GJA9P57773 515 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 NKX3-2P78367 333 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 GRIN2CQ14957 1233 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 RASIP1Q5U651 963 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 SLFN13Q68D06 897 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 CPLX2Q6PUV4 134 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 APOA5Q6Q788 366 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 CCDC144CPQ8IYA2 1237 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 ZNF444Q8N0Y2 327 aaPredicted RBP13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 ANKRD35Q8N283 1001 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 FAM133AQ8N9E0 248 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.73□□□□□ -0.213e-6■■■■■ 29.7
ERGIC3-220ENST00000640748 ABHD16BQ9H3Z7 469 aa13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 NCOA5Q9HCD5 579 aaKnown RBP13.73□□□□□ -0.21
ERGIC3-220ENST00000640748 CPLX1O14810 134 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 DTNBO60941 627 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 BMP3P12645 472 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 PTGS1P23219 599 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 DNAJB2P25686 324 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 IQCA1Q86XH1 822 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 FAM126BQ8IXS8 530 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 AGBL1Q96MI9 1066 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 GLT1D1Q96MS3 346 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 HOMER2Q9NSB8 354 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 FBXO40Q9UH90 709 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 SLC12A7Q9Y666 1083 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 DDX49Q9Y6V7 483 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 MYH6P13533 1939 aa13.72□□□□□ -0.21
ERGIC3-220ENST00000640748 NID2Q14112 1375 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 SOWAHBA6NEL2 793 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 GOLGA8AA7E2F4 631 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 TMEM232C9JQI7 657 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 H3BQV1 296 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 ARVCFO00192 962 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 CDKL5O76039 1030 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 CSF2RAP15509 400 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 TFAP4Q01664 338 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 GNASQ5JWF2 1037 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 TMEM240Q5SV17 173 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 RASGRP2Q7LDG7 609 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 USP38Q8NB14 1042 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 PCSK9Q8NBP7 692 aaKnown RBP13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 GMCL1Q96IK5 515 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 ZKSCAN3Q9BRR0 538 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 ZNF287Q9HBT7 754 aa13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 A1CFQ9NQ94 594 aaKnown RBP13.71□□□□□ -0.21
ERGIC3-220ENST00000640748 TNKSO95271 1327 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 MROH7Q68CQ1 1323 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 MUC3AQ02505 3323 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 CD4P01730 458 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 TSPY3P0CV98 308 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 TSPY8P0CW00 308 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 PBX2P40425 430 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 RCAN1P53805 252 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 BEX3Q00994 111 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 SEC23AQ15436 765 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 RAB11FIP4Q86YS3 637 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 SLC43A3Q8NBI5 491 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 ZNF576Q9H609 170 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 SENP2Q9HC62 589 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 IL17RBQ9NRM6 502 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 RNF146Q9NTX7 359 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 LMBRD1Q9NUN5 540 aa13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 GNEQ9Y223 722 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-220ENST00000640748 GRIN2DO15399 1336 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 GRXCR1A8MXD5 290 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 NMT2O60551 498 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 FDX1P10109 184 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 STAT2P52630 851 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 SNAP25P60880 206 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 CSPP1Q1MSJ5 1256 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 CCDC178Q5BJE1 867 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 MUM1L1Q5H9M0 696 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 TMEM63BQ5T3F8 832 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 MICU3Q86XE3 530 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 RGS22Q8NE09 1264 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 TIFAQ96CG3 184 aa13.69□□□□□ -0.22
ERGIC3-220ENST00000640748 PBX4Q9BYU1 374 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms