RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 LDHDQ86WU2 507 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 SIAH1Q8IUQ4 282 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CCDC144CPQ8IYA2 1237 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CDCA5Q96FF9 252 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 ANP32EQ9BTT0 268 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CFHR5Q9BXR6 569 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 NYAP2Q9P242 653 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 CLIP2Q9UDT6 1046 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 GGT7Q9UJ14 662 aa9.21□□□□□ -0.93
SCARB2-220ENST00000640076 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.21□□□□□ -0.93
SCARB2-220ENST00000640076 GOLGA8AA7E2F4 631 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 ESPNB1AK53 854 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 DHX16O60231 1041 aaKnown RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 CTDNEP1O95476 244 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 ASNSP08243 561 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 EEF2P13639 858 aaKnown RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 PTPREP23469 700 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 MZF1P28698 734 aaPredicted RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 CDC27P30260 824 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 INPP5BP32019 993 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 ADD1P35611 737 aaKnown RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 DEKP35659 375 aaKnown RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 RTN1Q16799 776 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 LRRC47Q8N1G4 583 aaKnown RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 FANCBQ8NB91 859 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 NUP133Q8WUM0 1156 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 CHMP4CQ96CF2 233 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 GPRASP2Q96D09 838 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 RPS6KC1Q96S38 1066 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 WRNIP1Q96S55 665 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 LLPHQ9BRT6 129 aaKnown RBP9.21□□□□□ -0.94
SCARB2-220ENST00000640076 GINM1Q9NU53 330 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 SIRPGQ9P1W8 387 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 FZD1Q9UP38 647 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 DOCK1Q14185 1865 aa9.21□□□□□ -0.94
SCARB2-220ENST00000640076 DTNBO60941 627 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 USP2O75604 605 aaPredicted RBP9.2□□□□□ -0.94
SCARB2-220ENST00000640076 PPP2R5BQ15173 497 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 ODR4Q5SWX8 454 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 NSUN7Q8NE18 718 aaKnown RBP9.2□□□□□ -0.94
SCARB2-220ENST00000640076 FBF1Q8TES7 1133 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 KLRG1Q96E93 195 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 MAP3K14Q99558 947 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 SAP130Q9H0E3 1048 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 NEUROD4Q9HD90 331 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 BAZ2BQ9UIF8 2168 aaKnown RBP9.2□□□□□ -0.94
SCARB2-220ENST00000640076 PAPPA2Q9BXP8 1791 aa9.2□□□□□ -0.94
SCARB2-220ENST00000640076 CCDC196A0A1B0GTZ2 297 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 A0A1W2PRG0 241 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 CPLX1O14810 134 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 JAK2O60674 1132 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 NF2P35240 595 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 DDIT3P35638 169 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 APLP1P51693 650 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 FOXD4Q12950 439 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 PRKG1Q13976 671 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 C4orf46Q504U0 113 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 MORN1Q5T089 497 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SCYL3Q8IZE3 742 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 CTCFLQ8NI51 663 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SMARCC2Q8TAQ2 1214 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SP7Q8TDD2 431 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SYNPO2Q9UMS6 1093 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SMC3Q9UQE7 1217 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 PTPDC1A2A3K4 754 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 C19orf67A6NJJ6 358 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 TRAF5O00463 557 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 PPP1R12BO60237 982 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 PDHBP11177 359 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 PAX3P23760 479 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 KIF5BP33176 963 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 FAM193AP78312 1265 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 GRM4Q14833 912 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 NTRK3Q16288 839 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 LONRF3Q496Y0 759 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 NOL9Q5SY16 702 aaKnown RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 C16orf46Q6P387 395 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 CPLX2Q6PUV4 134 aaKnown RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 RASGRP2Q7LDG7 609 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 ACER1Q8TDN7 264 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 ZKSCAN4Q969J2 545 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 C8orf48Q96LL4 319 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 IER2Q9BTL4 223 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 ARHGEF10LQ9HCE6 1279 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 RBM28Q9NW13 759 aaKnown RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 COLQQ9Y215 455 aaPredicted RBP9.19□□□□□ -0.94
SCARB2-220ENST00000640076 OTOFQ9HC10 1997 aa9.19□□□□□ -0.94
SCARB2-220ENST00000640076 SH3BP5O60239 455 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 CDKL5O76039 1030 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 SNHG28P0DPA3 235 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 IFNAR1P17181 557 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 GJB2P29033 226 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 ECE1P42892 770 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 PTPRNQ16849 979 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 TMTC3Q6ZXV5 915 aa9.18□□□□□ -0.94
SCARB2-220ENST00000640076 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms