RNA–Protein interactions for RNA: ENST00000640039.1

SPIN3-233, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,067 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-233	ENST00000640039	DDX49	Q9Y6V7	483 aa	Known RBP	18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	LRRC37A2	A6NM11	1700 aa		18.25	■□□□□ 0.51
SPIN3-233	ENST00000640039	KBTBD13	C9JR72	458 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	hCG_1984214	I3L0E3	225 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	CPLX1	O14810	134 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	DUSP11	O75319	330 aa	Known RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	EIF2AK2	P19525	551 aa	Known RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	EDNRB	P24530	442 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	NEK4	P51957	841 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	TNFAIP2	Q03169	654 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	CPLX2	Q6PUV4	134 aa	Known RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	RNF180	Q86T96	592 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	ZNF713	Q8N859	430 aa	Predicted RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	DIS3L	Q8TF46	1054 aa	Known RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	HTATIP2	Q9BUP3	242 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	C22orf23	Q9BZE7	217 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	NCOA5	Q9HCD5	579 aa	Known RBP	18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	PXMP2	Q9NR77	195 aa		18.24	■□□□□ 0.51
SPIN3-233	ENST00000640039	DNM1L	O00429	736 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	NAPA	P54920	295 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	STK3	Q13188	491 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	STXBP2	Q15833	593 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	WWC2	Q6AWC2	1192 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	IQSEC1	Q6DN90	963 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	LENG1	Q96BZ8	264 aa	Predicted RBP	18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	SLK	Q9H2G2	1235 aa	Predicted RBP	18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	C11orf49	Q9H6J7	331 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	PSTPIP2	Q9H939	334 aa		18.23	■□□□□ 0.51
SPIN3-233	ENST00000640039	PGK1	P00558	417 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	IFNAR1	P17181	557 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	ADCYAP1R1	P41586	468 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	AK2	P54819	239 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	LRRC41	Q15345	812 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	GJC2	Q5T442	439 aa	Predicted RBP	18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	PPP1R18	Q6NYC8	613 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	TRIM22	Q8IYM9	498 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	SLC26A6	Q9BXS9	759 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	RNF26	Q9BY78	433 aa	Predicted RBP	18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	SYNRG	Q9UMZ2	1314 aa		18.22	■□□□□ 0.51
SPIN3-233	ENST00000640039	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	PIK3CD	O00329	1044 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	PRPF3	O43395	683 aa	Known RBP	18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	NR3C2	P08235	984 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	SCG2	P13521	617 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	MNX1	P50219	401 aa	Predicted RBP	18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	PFKFB3	Q16875	520 aa	Predicted RBP	18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	TAPT1	Q6NXT6	567 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	USP17L6P	Q6QN14	398 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	SCFD2	Q8WU76	684 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	DPF3	Q92784	378 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	PHKB	Q93100	1093 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	WDR11	Q9BZH6	1224 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	PDGFC	Q9NRA1	345 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	BARHL2	Q9NY43	387 aa		18.21	■□□□□ 0.51
SPIN3-233	ENST00000640039	STXBP3	O00186	592 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	ADCY6	O43306	1168 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	CDKL5	O76039	1030 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	C6orf222	P0C671	652 aa	Predicted RBP	18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	MYCL	P12524	364 aa	Predicted RBP	18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	CCND2	P30279	289 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	SSRP1	Q08945	709 aa	Known RBP	18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	PGM5	Q15124	567 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	NTRK3	Q16288	839 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	TLK2	Q86UE8	772 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	PDCD2L	Q9BRP1	358 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	AP5M1	Q9H0R1	490 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	GLT8D2	Q9H1C3	349 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	PRO3102	Q9H379	93 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	TPCN1	Q9ULQ1	816 aa		18.2	■□□□□ 0.5
SPIN3-233	ENST00000640039	SPDYE3	A6NKU9	549 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	MEIS2	O14770	477 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	EIF3J	O75822	258 aa	Known RBP	18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	SMPD1	P17405	629 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	RBM25	P49756	843 aa	Known RBP	18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	ADCY7	P51828	1080 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	TTLL4	Q14679	1199 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	DUSP28	Q4G0W2	176 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	CHRDL2	Q6WN34	429 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	SEPT14	Q6ZU15	432 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	TEX2	Q8IWB9	1127 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	SENP6	Q9GZR1	1112 aa	Predicted RBP	18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	EHMT1	Q9H9B1	1298 aa		18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	RANBP2	P49792	3224 aa	Known RBP	18.19	■□□□□ 0.5
SPIN3-233	ENST00000640039	RBM47	A0AV96	593 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	SMCO2	A6NFE2	343 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	NKRF	O15226	690 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	PFKFB2	O60825	505 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	PPFIA3	O75145	1194 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	ADAMTS4	O75173	837 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	GJA9	P57773	515 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	UBE2S	Q16763	222 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	PCSK9	Q8NBP7	692 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	UPF3A	Q9H1J1	476 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	RIC8A	Q9NPQ8	531 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	GNE	Q9Y223	722 aa	Known RBP	18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039		Q9Y3F1	56 aa		18.18	■□□□□ 0.5
SPIN3-233	ENST00000640039	DYNC1LI2	O43237	492 aa	Predicted RBP	18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms