RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 UBXN2AP68543 259 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 MAEAQ7L5Y9 396 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 SPATA20Q8TB22 786 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 TRIM9Q9C026 710 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 RRP15Q9Y3B9 282 aaKnown RBP8.56□□□□□ -1.04
NECAP1-221ENST00000639955 SLIT2O94813 1529 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 COL18A1P39060 1754 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L15C9J2P7 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L13C9JLJ4 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L11C9JVI0 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L18D6R9N7 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L22D6RA61 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L17D6RBQ6 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L19D6RCP7 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L20D6RJB6 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 BAG3O95817 575 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 LONP1P36776 959 aaKnown RBP8.56□□□□□ -1.04
NECAP1-221ENST00000639955 PBX1P40424 430 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 SLC1A4P43007 532 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 CCT5P48643 541 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L24Q0WX57 530 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 CCDC70Q6NSX1 233 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 USP17L6PQ6QN14 398 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 KCNK18Q7Z418 384 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 NEK8Q86SG6 692 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 AFAP1L1Q8TED9 768 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 C6orf50Q9HD87 102 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 KCND1Q9NSA2 647 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 MAD2L2Q9UI95 211 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 L1RE1Q9UN81 338 aa8.56□□□□□ -1.04
NECAP1-221ENST00000639955 GLI3P10071 1580 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 NUP188Q5SRE5 1749 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 SMIM23A6NLE4 172 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 SFI1A8K8P3 1242 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 E9PMD0 336 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 CHMP2AO43633 222 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 CDK8P49336 464 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 MMP14P50281 582 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 PRPF4BQ13523 1007 aaKnown RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 WHAMMP3Q1A5X7 153 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 SV2BQ7L1I2 683 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 SELENOOQ9BVL4 669 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 ACBD3Q9H3P7 528 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 CWC15Q9P013 229 aaKnown RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 MYMKA6NI61 221 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 STXBP3O00186 592 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 ACTN2P35609 894 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 LIG3P49916 1009 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 DNM2P50570 870 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 KIF11P52732 1056 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 KRT83P78385 493 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 EHHADHQ08426 723 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 C12orf60Q5U649 245 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 KIAA0895Q8NCT3 520 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 DUSP9Q99956 384 aaKnown RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 FGFBP2Q9BYJ0 223 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 IKZF4Q9H2S9 585 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 HAUS4Q9H6D7 363 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 ATP8A2Q9NTI2 1148 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 RTCBQ9Y3I0 505 aaKnown RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 ZNF142P52746 1687 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 USP54Q70EL1 1684 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 NUP98P52948 1817 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 GOLGA6BA6NDN3 693 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 USO1O60763 962 aaKnown RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 TRADDQ15628 312 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 MAP9Q49MG5 647 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 HERC4Q5GLZ8 1057 aaPredicted RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 TTI2Q6NXR4 508 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 MAATS1Q7Z4T9 603 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 LSM14BQ9BX40 385 aaKnown RBP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 GBP3Q9H0R5 595 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.55□□□□□ -1.04
NECAP1-221ENST00000639955 CEP83Q9Y592 693 aa8.55□□□□□ -1.04
NECAP1-221ENST00000639955 LAMB4A4D0S4 1761 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 CHD4Q14839 1912 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 GOLGA6CA6NDK9 693 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 ZNF263O14978 683 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 TACC1O75410 805 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 GOLGA6DP0CG33 693 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 ACTN1P12814 892 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 RASA1P20936 1047 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 SEMA3FQ13275 785 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 ZYXQ15942 572 aaKnown RBP8.54□□□□□ -1.04
NECAP1-221ENST00000639955 SPICE1Q8N0Z3 855 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 FAM133AQ8N9E0 248 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 CNBD1Q8NA66 436 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 PIK3R5Q8WYR1 880 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 SEMA6BQ9H3T3 888 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 GOLGA6AQ9NYA3 693 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 ADAMTS1Q9UHI8 967 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 SCAF8Q9UPN6 1271 aaKnown RBP8.54□□□□□ -1.04
NECAP1-221ENST00000639955 PCNTO95613 3336 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 ECM29Q5VYK3 1845 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 KLRC4O43908 158 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 KRT14P02533 472 aa8.54□□□□□ -1.04
NECAP1-221ENST00000639955 CCNE1P24864 410 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms