RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 RMDN3Q96TC7 470 aa20.52■□□□□ 0.88
PTPN11-207ENST00000639857 PPP4R2Q9NY27 417 aa20.52■□□□□ 0.88
PTPN11-207ENST00000639857 COL20A1Q9P218 1284 aa20.52■□□□□ 0.88
PTPN11-207ENST00000639857 SLC12A7Q9Y666 1083 aa20.52■□□□□ 0.88
PTPN11-207ENST00000639857 DYNC1LI2O43237 492 aaPredicted RBP20.51■□□□□ 0.87
PTPN11-207ENST00000639857 CFBP00751 764 aa20.51■□□□□ 0.87
PTPN11-207ENST00000639857 CLTBP09497 229 aa20.51■□□□□ 0.87
PTPN11-207ENST00000639857 PPP2R5BQ15173 497 aa20.51■□□□□ 0.87
PTPN11-207ENST00000639857 DHX32Q7L7V1 743 aaKnown RBP20.51■□□□□ 0.87
PTPN11-207ENST00000639857 TBC1D5Q92609 795 aa20.51■□□□□ 0.87
PTPN11-207ENST00000639857 KCNB2Q92953 911 aa20.51■□□□□ 0.87
PTPN11-207ENST00000639857 TAAR1Q96RJ0 339 aa20.51■□□□□ 0.87
PTPN11-207ENST00000639857 UBE2OQ9C0C9 1292 aaKnown RBP20.51■□□□□ 0.87
PTPN11-207ENST00000639857 GPHNQ9NQX3 736 aaPredicted RBP20.51■□□□□ 0.87
PTPN11-207ENST00000639857 DCDC2CA8MYV0 355 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 CPT1AP50416 773 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 TTLL4Q14679 1199 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 STXBP2Q15833 593 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 TDHQ8IZJ6 230 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 RRP36Q96EU6 259 aaKnown RBP20.5■□□□□ 0.87
PTPN11-207ENST00000639857 MYL10Q9BUA6 226 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 PXMP2Q9NR77 195 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 SCN10AQ9Y5Y9 1956 aa20.5■□□□□ 0.87
PTPN11-207ENST00000639857 ARVCFO00192 962 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 KIAA0355O15063 1070 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 PQBP1O60828 265 aaKnown RBP20.49■□□□□ 0.87
PTPN11-207ENST00000639857 CDK7P50613 346 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 IRX5P78411 483 aaPredicted RBP20.49■□□□□ 0.87
PTPN11-207ENST00000639857 BEX3Q00994 111 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 EXOSC10Q01780 885 aaKnown RBP20.49■□□□□ 0.87
PTPN11-207ENST00000639857 BRDTQ58F21 947 aaPredicted RBP20.49■□□□□ 0.87
PTPN11-207ENST00000639857 ARHGEF16Q5VV41 709 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 RASEFQ8IZ41 740 aa20.49■□□□□ 0.87
PTPN11-207ENST00000639857 PRDM5Q9NQX1 630 aaPredicted RBP20.49■□□□□ 0.87
PTPN11-207ENST00000639857 SEC63Q9UGP8 760 aaKnown RBP20.49■□□□□ 0.87
PTPN11-207ENST00000639857 GCOM1H8Y6P7 765 aaPredicted RBP20.48■□□□□ 0.87
PTPN11-207ENST00000639857 EIF3JO75822 258 aaKnown RBP20.48■□□□□ 0.87
PTPN11-207ENST00000639857 POLR2MP0CAP2 368 aa20.48■□□□□ 0.87
PTPN11-207ENST00000639857 HSPA4P34932 840 aa20.48■□□□□ 0.87
PTPN11-207ENST00000639857 RCAN1P53805 252 aa20.48■□□□□ 0.87
PTPN11-207ENST00000639857 MDM2Q00987 491 aaPredicted RBP20.48■□□□□ 0.87
PTPN11-207ENST00000639857 COL9A3Q14050 684 aaPredicted RBP20.48■□□□□ 0.87
PTPN11-207ENST00000639857 FANCBQ8NB91 859 aa20.48■□□□□ 0.87
PTPN11-207ENST00000639857 POLR3EQ9NVU0 708 aa20.48■□□□□ 0.87
PTPN11-207ENST00000639857 KPNA6O60684 536 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 NR3C2P08235 984 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 TXNP10599 105 aaKnown RBP20.47■□□□□ 0.87
PTPN11-207ENST00000639857 FAAP100Q0VG06 881 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 LRIT3Q3SXY7 679 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 CCDC62Q6P9F0 684 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 APOA5Q6Q788 366 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 CXCL17Q6UXB2 119 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 SLC43A3Q8NBI5 491 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 OR6J1Q8NGC5 347 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 VTI1AQ96AJ9 217 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 RBM28Q9NW13 759 aaKnown RBP20.47■□□□□ 0.87
PTPN11-207ENST00000639857 MYH7BA7E2Y1 1941 aa20.47■□□□□ 0.87
PTPN11-207ENST00000639857 TRIM43BA6NCK2 446 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 TLR3O15455 904 aaKnown RBP20.46■□□□□ 0.87
PTPN11-207ENST00000639857 EIF2AK2P19525 551 aaKnown RBP20.46■□□□□ 0.87
PTPN11-207ENST00000639857 ADCK5Q3MIX3 580 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 FAM126BQ8IXS8 530 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 TRIM43Q96BQ3 446 aaPredicted RBP20.46■□□□□ 0.87
PTPN11-207ENST00000639857 PDCD2LQ9BRP1 358 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 LRRC2Q9BYS8 371 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 TMEM39AQ9NV64 488 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 FRMPD4Q14CM0 1322 aa20.46■□□□□ 0.87
PTPN11-207ENST00000639857 LAMA3Q16787 3333 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 A6NJR5 290 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 PIK3CDO00329 1044 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 PLEKHA8P1O95397 391 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 ITGA7Q13683 1181 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 TMEM63BQ5T3F8 832 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 KCNV1Q6PIU1 500 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 TMTC3Q6ZXV5 915 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 SH3RF1Q7Z6J0 888 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 MICU3Q86XE3 530 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 TEX2Q8IWB9 1127 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 SRBD1Q8N5C6 995 aaKnown RBP20.45■□□□□ 0.86
PTPN11-207ENST00000639857 TBX21Q9UL17 535 aa20.45■□□□□ 0.86
PTPN11-207ENST00000639857 HOXA13P31271 388 aaPredicted RBP20.44■□□□□ 0.86
PTPN11-207ENST00000639857 PURAQ00577 322 aaKnown RBP20.44■□□□□ 0.86
PTPN11-207ENST00000639857 PGM5Q15124 567 aa20.44■□□□□ 0.86
PTPN11-207ENST00000639857 GPR153Q6NV75 609 aa20.44■□□□□ 0.86
PTPN11-207ENST00000639857 FBXL16Q8N461 479 aa20.44■□□□□ 0.86
PTPN11-207ENST00000639857 ZBTB43O43298 467 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 STAM2O75886 525 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 ARIH2O95376 493 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 GH1P01241 217 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 CD4P01730 458 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 RAG1P15918 1043 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 RXRAP19793 462 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 PTGS1P23219 599 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 SEPT14Q6ZU15 432 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 VSIG10LQ86VR7 867 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 BADQ92934 168 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 CUL5Q93034 780 aa20.43■□□□□ 0.86
PTPN11-207ENST00000639857 EMID1Q96A84 441 aaPredicted RBP20.43■□□□□ 0.86
PTPN11-207ENST00000639857 MTG1Q9BT17 334 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms