RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 SAT1P21673 171 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 RIOK1Q9BRS2 568 aaKnown RBP20.14■□□□□ 0.81
SCARB2-213ENST00000638680 ATP1A3P13637 1013 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 NR5A1Q13285 461 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 ARHGEF16Q5VV41 709 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 FBXO11Q86XK2 927 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 EIF4A3P38919 411 aaKnown RBP20.14■□□□□ 0.81
SCARB2-213ENST00000638680 CHRNDQ07001 517 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 TMED2Q15363 201 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 PLA2G4DQ86XP0 818 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 GREM2Q9H772 168 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 JRKLQ9Y4A0 524 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 PCDHA13Q9Y5I0 950 aa20.14■□□□□ 0.81
SCARB2-213ENST00000638680 SGK1O00141 431 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 RNF168Q8IYW5 571 aaPredicted RBP20.13■□□□□ 0.81
SCARB2-213ENST00000638680 KLHL29Q96CT2 875 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 TNNC2P02585 160 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 INHBAP08476 426 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 SLCO1A2P46721 670 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 MFAP3P55082 362 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 FAF1Q9UNN5 650 aaPredicted RBP20.13■□□□□ 0.81
SCARB2-213ENST00000638680 CACNB1Q02641 598 aaPredicted RBP20.13■□□□□ 0.81
SCARB2-213ENST00000638680 SMCR8Q8TEV9 937 aaPredicted RBP20.13■□□□□ 0.81
SCARB2-213ENST00000638680 GLG1Q92896 1179 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 NOVA2Q9UNW9 492 aaKnown RBP20.13■□□□□ 0.81
SCARB2-213ENST00000638680 NR1D1P20393 614 aa20.13■□□□□ 0.81
SCARB2-213ENST00000638680 PIK3CAP42336 1068 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 BTDP43251 543 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 TERF2Q15554 542 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ALS2CLQ60I27 953 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 LRRC43Q8N309 656 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 PLEKHG3A1L390 1219 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 MYO1FO00160 1098 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 TSPYL2Q9H2G4 693 aaPredicted RBP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 H7C0C1 242 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ATP5OP48047 213 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 DMP1Q13316 513 aaPredicted RBP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 RBBP5Q15291 538 aaKnown RBP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ODR4Q5SWX8 454 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 AK8Q96MA6 479 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 MMS19Q96T76 1030 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 CIAO1O76071 339 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 PABPC4Q13310 644 aaKnown RBP eCLIP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 SPATS2LQ9NUQ6 558 aaKnown RBP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ECEL1O95672 775 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 PCP11498 1178 aaKnown RBP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 SGO2Q562F6 1265 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 HVCN1Q96D96 273 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 NACA2Q9H009 215 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 CNOT10Q9H9A5 744 aaKnown RBP20.12■□□□□ 0.81
SCARB2-213ENST00000638680 GPR108Q9NPR9 543 aa20.12■□□□□ 0.81
SCARB2-213ENST00000638680 ERBB4Q15303 1308 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 LMNB2Q03252 620 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 METTL13Q8N6R0 699 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 PBKQ96KB5 322 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 RNF14Q9UBS8 474 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 ARHGEF18Q6ZSZ5 1173 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 PAGE5Q96GU1 130 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 THAP9Q9H5L6 903 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 ZBED6P86452 979 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 PTK2Q05397 1052 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 E2F4Q16254 413 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 MMEL1Q495T6 779 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 CYP4F22Q6NT55 531 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 ZNF653Q96CK0 615 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 NOD1Q9Y239 953 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 MRPL11Q9Y3B7 192 aaKnown RBP20.11■□□□□ 0.81
SCARB2-213ENST00000638680 SH2B2O14492 632 aaPredicted RBP20.11■□□□□ 0.81
SCARB2-213ENST00000638680 PDE8BO95263 885 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 PSMC2P35998 433 aaKnown RBP20.11■□□□□ 0.81
SCARB2-213ENST00000638680 GARSP41250 739 aaKnown RBP20.11■□□□□ 0.81
SCARB2-213ENST00000638680 RFX6Q8HWS3 928 aa20.11■□□□□ 0.81
SCARB2-213ENST00000638680 GPHNQ9NQX3 736 aaPredicted RBP20.11■□□□□ 0.81
SCARB2-213ENST00000638680 TOM1O60784 492 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 GSTA1P08263 222 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 GSTA2P09210 222 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 ALAS1P13196 640 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 CDC25AP30304 524 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 CYP27A1Q02318 531 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 CUL4BQ13620 913 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 TCP11X2Q5H9J9 407 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 ARMC9Q7Z3E5 817 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 ANKRD35Q8N283 1001 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 MED10Q9BTT4 135 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 ACTR5Q9H9F9 607 aaPredicted RBP20.1■□□□□ 0.81
SCARB2-213ENST00000638680 ANAPC5Q9UJX4 755 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 MAPK4P31152 587 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 POLA2Q14181 598 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 RINT1Q6NUQ1 792 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 PCDHB6Q9Y5E3 794 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 PRKG1Q13976 671 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 TOGARAM2Q6ZUX3 1019 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 GDAP1Q8TB36 358 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 RNASELQ05823 741 aaKnown RBP20.1■□□□□ 0.81
SCARB2-213ENST00000638680 BRDTQ58F21 947 aaPredicted RBP20.1■□□□□ 0.81
SCARB2-213ENST00000638680 TBK1Q9UHD2 729 aa20.1■□□□□ 0.81
SCARB2-213ENST00000638680 SRPRBQ9Y5M8 271 aaKnown RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms