RNA–Protein interactions for RNA: ENST00000638400.1

GFAP-227, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,106 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-227ENST00000638400 Q9Y3F1 56 aa14.53□□□□□ -0.08
GFAP-227ENST00000638400 PNMA6FA0A0J9YX94 578 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 OPLAHO14841 1288 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 DYNC1LI2O43237 492 aaPredicted RBP14.52□□□□□ -0.09
GFAP-227ENST00000638400 CYTH3O43739 400 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 ZEB2O60315 1214 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 PQBP1O60828 265 aaKnown RBP14.52□□□□□ -0.09
GFAP-227ENST00000638400 CFBP00751 764 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 CALM1P0DP23 149 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 CALM2P0DP24 149 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 CALM3P0DP25 149 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 GNAQP50148 359 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 HSD17B4P51659 736 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 BEX3Q00994 111 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
GFAP-227ENST00000638400 COL9A3Q14050 684 aaPredicted RBP14.52□□□□□ -0.09
GFAP-227ENST00000638400 PPP2R5BQ15173 497 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 HSCBQ8IWL3 235 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 NEK1Q96PY6 1258 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 IWS1Q96ST2 819 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 RMDN3Q96TC7 470 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 LZTS2Q9BRK4 669 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 SPZ1Q9BXG8 430 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 UBE2OQ9C0C9 1292 aaKnown RBP14.52□□□□□ -0.09
GFAP-227ENST00000638400 MAP3K20Q9NYL2 800 aaKnown RBP14.52□□□□□ -0.09
GFAP-227ENST00000638400 COL20A1Q9P218 1284 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 SLC12A7Q9Y666 1083 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 DNAH12Q6ZR08 3092 aa14.52□□□□□ -0.09
GFAP-227ENST00000638400 A0A0U1RQG5 324 aaPredicted RBP14.51□□□□□ -0.09
GFAP-227ENST00000638400 CABYRO75952 493 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 CLTBP09497 229 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 SMARCA1P28370 1054 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 MDM2Q00987 491 aaPredicted RBP14.51□□□□□ -0.09
GFAP-227ENST00000638400 TSGA10IPQ3SY00 556 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 ANKRD33Q7Z3H0 272 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 SGMS1Q86VZ5 419 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 SAMD3Q8N6K7 520 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 VTI1AQ96AJ9 217 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 RRP36Q96EU6 259 aaKnown RBP14.51□□□□□ -0.09
GFAP-227ENST00000638400 TOX2Q96NM4 488 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 TAAR1Q96RJ0 339 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 LRRC2Q9BYS8 371 aa14.51□□□□□ -0.09
GFAP-227ENST00000638400 MROH7Q68CQ1 1323 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 DCDC2CA8MYV0 355 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 NKRFO15226 690 aaKnown RBP eCLIP14.5□□□□□ -0.09
GFAP-227ENST00000638400 REC8O95072 547 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 HMGB1P09429 215 aaKnown RBP14.5□□□□□ -0.09
GFAP-227ENST00000638400 EIF2AK2P19525 551 aaKnown RBP14.5□□□□□ -0.09
GFAP-227ENST00000638400 PTMSP20962 102 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 PTGS1P23219 599 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 STXBP2Q15833 593 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 TMEM63BQ5T3F8 832 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 ARHGEF16Q5VV41 709 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 CXCL17Q6UXB2 119 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 RASEFQ8IZ41 740 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 PIBF1Q8WXW3 757 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 PXMP2Q9NR77 195 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 PCDH10Q9P2E7 1040 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 SEC63Q9UGP8 760 aaKnown RBP14.5□□□□□ -0.09
GFAP-227ENST00000638400 LCTP09848 1927 aa14.5□□□□□ -0.09
GFAP-227ENST00000638400 TRIM43BA6NCK2 446 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 GCOM1H8Y6P7 765 aaPredicted RBP14.49□□□□□ -0.09
GFAP-227ENST00000638400 ARVCFO00192 962 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 PLEKHA8P1O95397 391 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 POLR2MP0CAP2 368 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 TXNP10599 105 aaKnown RBP14.49□□□□□ -0.09
GFAP-227ENST00000638400 RXRAP19793 462 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 HOXA13P31271 388 aaPredicted RBP14.49□□□□□ -0.09
GFAP-227ENST00000638400 CPT1AP50416 773 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 TTLL4Q14679 1199 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 BRDTQ58F21 947 aaPredicted RBP14.49□□□□□ -0.09
GFAP-227ENST00000638400 SYNE3Q6ZMZ3 975 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 DHX32Q7L7V1 743 aaKnown RBP14.49□□□□□ -0.09
GFAP-227ENST00000638400 SH3RF1Q7Z6J0 888 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 MICU3Q86XE3 530 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 TDHQ8IZJ6 230 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 OR6J1Q8NGC5 347 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 TRIM43Q96BQ3 446 aaPredicted RBP14.49□□□□□ -0.09
GFAP-227ENST00000638400 LAMA3Q16787 3333 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 MCM3APO60318 1980 aa14.49□□□□□ -0.09
GFAP-227ENST00000638400 KIAA0355O15063 1070 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 EIF3JO75822 258 aaKnown RBP14.48□□□□□ -0.09
GFAP-227ENST00000638400 CDK7P50613 346 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 EXOSC10Q01780 885 aaKnown RBP14.48□□□□□ -0.09
GFAP-227ENST00000638400 C1QBPQ07021 282 aaKnown RBP14.48□□□□□ -0.09
GFAP-227ENST00000638400 FAAP100Q0VG06 881 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 ADCK5Q3MIX3 580 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 APOA5Q6Q788 366 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 RAB11FIP4Q86YS3 637 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 SRBD1Q8N5C6 995 aaKnown RBP14.48□□□□□ -0.09
GFAP-227ENST00000638400 FANCBQ8NB91 859 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 KCNB2Q92953 911 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 PDCD2LQ9BRP1 358 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 SEZ6LQ9BYH1 1024 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 TMEM39AQ9NV64 488 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 POLR3EQ9NVU0 708 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 SMCHD1A6NHR9 2005 aa14.48□□□□□ -0.09
GFAP-227ENST00000638400 TLR3O15455 904 aaKnown RBP14.47□□□□□ -0.09
GFAP-227ENST00000638400 ARIH2O95376 493 aa14.47□□□□□ -0.09
GFAP-227ENST00000638400 NR3C2P08235 984 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms