RNA–Protein interactions for RNA: ENST00000638390.1

PRRC2B-210, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 1 (best) BASIC

Gene PRRC2B, Length 1,084 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-210ENST00000638390 A0A1W2PQY0 241 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 GOLGA8AA7E2F4 631 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 GOLGA8BA8MQT2 603 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 GCOM1H8Y6P7 765 aaPredicted RBP17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 POLR2MP0CAP2 368 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 ACLYP53396 1101 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 RTP1P59025 263 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 FGD1P98174 961 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 FUT2Q10981 343 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 KCNA10Q16322 511 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 RTN1Q16799 776 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 DUSP28Q4G0W2 176 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 TMEM63BQ5T3F8 832 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 ARHGEF16Q5VV41 709 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 PCSK9Q8NBP7 692 aaKnown RBP17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 BRF1Q92994 677 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 FERMT2Q96AC1 680 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 WDR11Q9BZH6 1224 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 TM6SF1Q9BZW5 370 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 ZSWIM6Q9HCJ5 1215 aa17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
PRRC2B-210ENST00000638390 EIF2AK2P19525 551 aaKnown RBP17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 PTGS1P23219 599 aa17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 HOXA13P31271 388 aaPredicted RBP17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 APOBRQ0VD83 1088 aa17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 NOL8Q76FK4 1167 aaKnown RBP17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 RUFY3Q7L099 469 aa17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 SCFD2Q8WU76 684 aa17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 PDCD2LQ9BRP1 358 aa17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
PRRC2B-210ENST00000638390 FRMPD4Q14CM0 1322 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 NKRFO15226 690 aaKnown RBP eCLIP17.08■□□□□ 0.322e-8■■□□□ 12.8
PRRC2B-210ENST00000638390 ASGR1P07306 291 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 CDC27P30260 824 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.326e-10■□□□□ 8.6
PRRC2B-210ENST00000638390 PPP2R5BQ15173 497 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 STXBP2Q15833 593 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 GNASQ5JWF2 1037 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.32
PRRC2B-210ENST00000638390 hCG_1642624A0A1W2PR95 340 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 PIK3CDO00329 1044 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 DYNC1LI2O43237 492 aaPredicted RBP17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 NR3C2P08235 984 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 EVCP57679 992 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 BEX3Q00994 111 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 PGM5Q15124 567 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 TRIM60Q495X7 471 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 STARD7Q9NQZ5 370 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 ZMYND8Q9ULU4 1186 aaPredicted RBP17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 ATP11BQ9Y2G3 1177 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
PRRC2B-210ENST00000638390 ELP1O95163 1332 aa17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 EIF5BO60841 1220 aaKnown RBP17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 EIF3JO75822 258 aaKnown RBP17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 ARIH2O95376 493 aa17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 TOB2Q14106 344 aaPredicted RBP17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 TTLL4Q14679 1199 aa17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 FSCN1Q16658 493 aaKnown RBP17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 CCDC62Q6P9F0 684 aa17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 GLT1D1Q96MS3 346 aa17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 PRO3102Q9H379 93 aa17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
PRRC2B-210ENST00000638390 CCDC196A0A1B0GTZ2 297 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 hCG_1984214I3L0E3 225 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 MEIS2O14770 477 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 TXNP10599 105 aaKnown RBP17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 SYN1P17600 705 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 ANAPC15P60006 121 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 WWC2Q6AWC2 1192 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 VSIG10LQ86VR7 867 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 FCHSD1Q86WN1 690 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 ZNF713Q8N859 430 aaPredicted RBP17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 IL31RAQ8NI17 732 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.328e-7■□□□□ 10.6
PRRC2B-210ENST00000638390 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 COLQQ9Y215 455 aaPredicted RBP17.05■□□□□ 0.32
PRRC2B-210ENST00000638390 KIAA1217Q5T5P2 1943 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 ZEB2O60315 1214 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 CABYRO75952 493 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 RGS20O76081 388 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 CCND2P30279 289 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 PPP1R18Q6NYC8 613 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 USP17L6PQ6QN14 398 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 SEPT14Q6ZU15 432 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 SMARCC2Q8TAQ2 1214 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 COPS5Q92905 334 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 CUL5Q93034 780 aa17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 UPF3BQ9BZI7 483 aaKnown RBP17.04■□□□□ 0.32
PRRC2B-210ENST00000638390 A0A0U1RQG5 324 aaPredicted RBP17.03■□□□□ 0.32
PRRC2B-210ENST00000638390 MYCLP12524 364 aaPredicted RBP17.03■□□□□ 0.32
PRRC2B-210ENST00000638390 PDIA3P30101 505 aaKnown RBP17.03■□□□□ 0.32
PRRC2B-210ENST00000638390 CPT1AP50416 773 aa17.03■□□□□ 0.32
PRRC2B-210ENST00000638390 CDK7P50613 346 aa17.03■□□□□ 0.32
PRRC2B-210ENST00000638390 TLE2Q04725 743 aa17.03■□□□□ 0.32
PRRC2B-210ENST00000638390 TYW1BQ6NUM6 668 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms