RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SV2BQ7L1I2 683 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 TGFBRAP1Q8WUH2 860 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 SELENOOQ9BVL4 669 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 PVALEFA0A1B0GWK0 134 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 HOXA7P31268 230 aaPredicted RBP22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 CCDC84Q86UT8 332 aaPredicted RBP22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 NDST4Q9H3R1 872 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 SEC63Q9UGP8 760 aaKnown RBP22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 NARFQ9UHQ1 456 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 PCDHA13Q9Y5I0 950 aa22.37■■□□□ 1.17
SYNGAP1-227ENST00000638142 LDHCP07864 332 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 UNC13DQ70J99 1090 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 CERS3Q8IU89 383 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 CREG2Q8IUH2 290 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 TBCKQ8TEA7 893 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 ARHGAP20Q9P2F6 1191 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 RSPH14Q9UHP6 348 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 ESYT2A0FGR8 921 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 C2orf54Q08AI8 447 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 MAN2A1Q16706 1144 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 TPTE2Q6XPS3 522 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 KRT26Q7Z3Y9 468 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 C2CD5Q86YS7 1000 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 SLC39A2Q9NP94 309 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 FAM184BQ9ULE4 1060 aa22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 AHDC1Q5TGY3 1603 aaPredicted RBP22.36■■□□□ 1.17
SYNGAP1-227ENST00000638142 ZMYND10O75800 440 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 PLEKP08567 350 aaPredicted RBP22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 MYBL2P10244 700 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 KIF11P52732 1056 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 DIXDC1Q155Q3 683 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 LRRC31Q6UY01 552 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 EFCC1Q9HA90 598 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 TM4SF1P30408 202 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 REXO1Q8N1G1 1221 aaKnown RBP22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 GUF1Q8N442 669 aaKnown RBP22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 AENQ8WTP8 325 aaKnown RBP22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 CAPN6Q9Y6Q1 641 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 SPATA31A5Q5VU36 1347 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 SPATA31A7Q8IWB4 1347 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 SNED1Q8TER0 1413 aa22.35■■□□□ 1.17
SYNGAP1-227ENST00000638142 NKRFO15226 690 aaKnown RBP eCLIP22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 LRRC63Q05C16 580 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 GRB10Q13322 594 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 BARGINQ6ZT62 677 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 HPS3Q969F9 1004 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 ALS2CR12Q96Q35 445 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 EYA3Q99504 573 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 CPVLQ9H3G5 476 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 DEF6Q9H4E7 631 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 BLOC1S4Q9NUP1 217 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 TCP1P17987 556 aaKnown RBP22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 GGCXP38435 758 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 FXR2P51116 673 aaKnown RBP eCLIP22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 FOXR1Q6PIV2 292 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 C16orf86Q6ZW13 317 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 MAPKAPK5Q8IW41 473 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 FAM207AQ9NSI2 230 aaPredicted RBP22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 LEMD3Q9Y2U8 911 aa22.34■■□□□ 1.17
SYNGAP1-227ENST00000638142 hCG_1984214I3L0E3 225 aa22.33■■□□□ 1.17
SYNGAP1-227ENST00000638142 LTBP4Q8N2S1 1624 aa22.33■■□□□ 1.17
SYNGAP1-227ENST00000638142 ZNF713Q8N859 430 aaPredicted RBP22.33■■□□□ 1.17
SYNGAP1-227ENST00000638142 LARP4BQ92615 738 aaKnown RBP22.33■■□□□ 1.17
SYNGAP1-227ENST00000638142 MTMR9Q96QG7 549 aa22.33■■□□□ 1.17
SYNGAP1-227ENST00000638142 SAP30BPQ9UHR5 308 aaKnown RBP22.33■■□□□ 1.17
SYNGAP1-227ENST00000638142 MYMKA6NI61 221 aa22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 EIF4A3P38919 411 aaKnown RBP22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 CDK8P49336 464 aa22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 FOXR2Q6PJQ5 311 aa22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 GSPT2Q8IYD1 628 aaKnown RBP22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 SMCR8Q8TEV9 937 aaPredicted RBP22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 EDEM3Q9BZQ6 932 aa22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 HYOU1Q9Y4L1 999 aa22.33■■□□□ 1.16
SYNGAP1-227ENST00000638142 AGPSO00116 658 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 EPHB6O15197 1021 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 AKR1B10O60218 316 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 TXKP42681 527 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 CALCRLQ16602 461 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 TMEM266Q2M3C6 531 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 USP17L2Q6R6M4 530 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 MMRN2Q9H8L6 949 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 GOLGA6BA6NDN3 693 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 PJA2O43164 708 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 MAGEA9P43362 315 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 SPATA4Q8NEY3 305 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 CDK5RAP3Q96JB5 506 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 GDAP1L1Q96MZ0 367 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 OSBPL9Q96SU4 736 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 RTFDC1Q9BY42 306 aaPredicted RBP22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 RAB34Q9BZG1 259 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 MLXIPQ9HAP2 919 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 ANKIB1Q9P2G1 1089 aa22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 SRP68Q9UHB9 627 aaKnown RBP22.32■■□□□ 1.16
SYNGAP1-227ENST00000638142 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
SYNGAP1-227ENST00000638142 PPFIA4O75335 1185 aa22.31■■□□□ 1.16
SYNGAP1-227ENST00000638142 MOCS3O95396 460 aa22.31■■□□□ 1.16
SYNGAP1-227ENST00000638142 ARHGAP27Q6ZUM4 889 aa22.31■■□□□ 1.16
SYNGAP1-227ENST00000638142 PNMA5Q96PV4 448 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms