RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 CYTH3O43739 400 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 CABYRO75952 493 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 RAG1P15918 1043 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 FAAP100Q0VG06 881 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 TRAF1Q13077 416 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 ARHGEF16Q5VV41 709 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 TMTC2Q8N394 836 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 OR6J1Q8NGC5 347 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 SCFD2Q8WU76 684 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 PIBF1Q8WXW3 757 aa19.44■□□□□ 0.7
CACNA1A-259ENST00000638114 LAMA3Q16787 3333 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 PNMA6FA0A0J9YX94 578 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 EIF2AK2P19525 551 aaKnown RBP19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 KIF5BP33176 963 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 CDK7P50613 346 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 LRIT3Q3SXY7 679 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 IWS1Q96ST2 819 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 MAP3K14Q99558 947 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 LRRC2Q9BYS8 371 aa19.43■□□□□ 0.7
CACNA1A-259ENST00000638114 SZT2Q5T011 3432 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 NKRFO15226 690 aaKnown RBP eCLIP19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 TXNP10599 105 aaKnown RBP19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 ITGB8P26012 769 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 CPT1AP50416 773 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 HSD17B4P51659 736 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 TTLL4Q14679 1199 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 STXBP2Q15833 593 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 PXMP2Q9NR77 195 aa19.42■□□□□ 0.7
CACNA1A-259ENST00000638114 TLR3O15455 904 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 RXRAP19793 462 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 HOXA13P31271 388 aaPredicted RBP19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 LIFRP42702 1097 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 GHRHRQ02643 423 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 ITGA7Q13683 1181 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 SEPT14Q6ZU15 432 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 FAM126BQ8IXS8 530 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 COPS5Q92905 334 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 SPZ1Q9BXG8 430 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 POLR3EQ9NVU0 708 aa19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 MAP3K20Q9NYL2 800 aaKnown RBP19.41■□□□□ 0.7
CACNA1A-259ENST00000638114 ARIH2O95376 493 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 MYL3P08590 195 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 PSMC6P62333 389 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 BRDTQ58F21 947 aaPredicted RBP19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 RAB11FIP4Q86YS3 637 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 SAMD3Q8N6K7 520 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 RRP36Q96EU6 259 aaKnown RBP19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 NEK1Q96PY6 1258 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 TBX21Q9UL17 535 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 SLC12A7Q9Y666 1083 aa19.4■□□□□ 0.7
CACNA1A-259ENST00000638114 GCOM1H8Y6P7 765 aaPredicted RBP19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 PLEKHA8P1O95397 391 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 NR3C2P08235 984 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 POLR2MP0CAP2 368 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 CALM1P0DP23 149 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 CALM2P0DP24 149 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 CALM3P0DP25 149 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 GNAQP50148 359 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 FPGSQ05932 587 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 SHHQ15465 462 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 SLC43A3Q8NBI5 491 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 LZTS2Q9BRK4 669 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 SEC63Q9UGP8 760 aaKnown RBP19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 GRIN2DO15399 1336 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.69
CACNA1A-259ENST00000638114 EIF3JO75822 258 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 TIMP1P01033 207 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 MYCLP12524 364 aaPredicted RBP19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 SMARCA1P28370 1054 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 PURAQ00577 322 aaKnown RBP19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 LY6KQ17RY6 165 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 C9orf50Q5SZB4 431 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 CCDC62Q6P9F0 684 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 FCHSD1Q86WN1 690 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 RASEFQ8IZ41 740 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 PDCD2LQ9BRP1 358 aa19.38■□□□□ 0.69
CACNA1A-259ENST00000638114 CD4P01730 458 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 KRT32Q14532 448 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 ADCK5Q3MIX3 580 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 SYNE3Q6ZMZ3 975 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 MICU3Q86XE3 530 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 CMTR1Q8N1G2 835 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 SRBD1Q8N5C6 995 aaKnown RBP19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 TCEANC2Q96MN5 208 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 MTG1Q9BT17 334 aaPredicted RBP19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 SEZ6LQ9BYH1 1024 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 PPP1R12CQ9BZL4 782 aa19.37■□□□□ 0.69
CACNA1A-259ENST00000638114 A6NJR5 290 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 GH1P01241 217 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 EPHB4P54760 987 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 PGM5Q15124 567 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 TSGA10IPQ3SY00 556 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 DHX32Q7L7V1 743 aaKnown RBP19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 SGMS1Q86VZ5 419 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 MRVI1Q9Y6F6 885 aa19.36■□□□□ 0.69
CACNA1A-259ENST00000638114 B4GALT4O60513 344 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 KPNA6O60684 536 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 CCND2P30279 289 aa19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 EXOSC10Q01780 885 aaKnown RBP19.35■□□□□ 0.69
CACNA1A-259ENST00000638114 ARHGAP1Q07960 439 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms