RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 FMO2Q99518 471 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 CAPRIN1Q14444 709 aaKnown RBP20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 KIF19Q2TAC6 998 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 NCLNQ969V3 563 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 NBNO60934 754 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 MTX1Q13505 466 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 TTBK2Q6IQ55 1244 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 SNX19Q92543 992 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 DMTNQ08495 405 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 EXOC8Q8IYI6 725 aa20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 ARMCX3Q9UH62 379 aaPredicted RBP20.91■□□□□ 0.94
CACNA1A-257ENST00000638009 TCF3P15923 654 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 LUZP2Q86TE4 346 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 SCG3Q8WXD2 468 aaKnown RBP20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 KRT26Q7Z3Y9 468 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 AARSP49588 968 aaKnown RBP eCLIP20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 WASHC5Q12768 1159 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 CEP78Q5JTW2 689 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 ACAD11Q709F0 780 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 MYLK4Q86YV6 388 aaPredicted RBP20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 SLF1Q9BQI6 1058 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 GYG2O15488 501 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 GNPTABQ3T906 1256 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 MAML1Q92585 1016 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 H7C1D1 291 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 KRT16P08779 473 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 LSM14BQ9BX40 385 aaKnown RBP20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 DENND2AQ9ULE3 1009 aa20.9■□□□□ 0.94
CACNA1A-257ENST00000638009 ADCY7P51828 1080 aa20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 AP1B1Q10567 949 aa20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 ZNF174Q15697 407 aa20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 TAF1BQ53T94 588 aaPredicted RBP20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 KCNJ18B7U540 433 aa20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 POC1B-GALNT4F8VUJ3 575 aa20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 KCNJ12Q14500 433 aa20.89■□□□□ 0.94
CACNA1A-257ENST00000638009 CFTRP13569 1480 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 SLC12A1Q13621 1099 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 CYTH1Q15438 398 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 DNAAF3Q8N9W5 541 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 SNX29Q8TEQ0 813 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 SELENONQ9NZV5 590 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 WDR64B1ANS9 1081 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 CDH2P19022 906 aaPredicted RBP20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 CNGA2Q16280 664 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 MYO1FO00160 1098 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 TOMM70O94826 608 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 TRAF7Q6Q0C0 670 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 STK17AQ9UEE5 414 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 SLFN14P0C7P3 912 aa20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 NCF2P19878 526 aaPredicted RBP20.89■□□□□ 0.93
CACNA1A-257ENST00000638009 URB1O60287 2271 aaKnown RBP20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 ATP2B4P23634 1241 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 GPBP1L1Q9HC44 474 aaPredicted RBP20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 HIF1AQ16665 826 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 TRIM67Q6ZTA4 783 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 NLRX1Q86UT6 975 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 RETREG2Q8NC44 543 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 CLEC11AQ9Y240 323 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 UBE4BO95155 1302 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 H7C0C1 242 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 ATP5OP48047 213 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 PBKQ96KB5 322 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 NDEL1Q9GZM8 345 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 TMED10P49755 219 aaKnown RBP20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 PTK2Q05397 1052 aa20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 WDR75Q8IWA0 830 aaKnown RBP20.88■□□□□ 0.93
CACNA1A-257ENST00000638009 AOX1Q06278 1338 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 WAPLQ7Z5K2 1190 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 NOSTRINQ8IVI9 506 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 DEPTORQ8TB45 409 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 FAM207AQ9NSI2 230 aaPredicted RBP20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 ABCB4P21439 1286 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 GUCY2DQ02846 1103 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 NLRP9Q7RTR0 991 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 ZBTB3Q9H5J0 574 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 MRPL47Q9HD33 250 aaKnown RBP20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 EXOC1LA0A1B0GW35 172 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 MED7O43513 233 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 SCYL2Q6P3W7 929 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 GAS7O60861 476 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 RPS6KB1P23443 525 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 MBD2Q9UBB5 411 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 UBXN8O00124 270 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 DRP2Q13474 957 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 RASSF9O75901 435 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 NBPF20Q3BBV1 942 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 GALNT17Q6IS24 598 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 PDE11AQ9HCR9 933 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 COPB1P53618 953 aaKnown RBP20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 U2AF1L4Q8WU68 220 aaKnown RBP20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 DEPDC1BQ8WUY9 529 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 GINS2Q9Y248 185 aa20.87■□□□□ 0.93
CACNA1A-257ENST00000638009 DHX9Q08211 1270 aaKnown RBP20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 TSC22D4Q9Y3Q8 395 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 SMARCA1P28370 1054 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 PIK3CAP42336 1068 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 CIITAP33076 1130 aa20.86■□□□□ 0.93
CACNA1A-257ENST00000638009 YWHAHQ04917 246 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms