RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 ME3Q16798 604 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 CCDC144BQ3MJ40 725 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 TAPT1Q6NXT6 567 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 USP17L6PQ6QN14 398 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 UBE2Q1Q7Z7E8 422 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-210ENST00000635675 MPHOSPH6Q99547 160 aaKnown RBP11.21□□□□□ -0.61
LINC00339-210ENST00000635675 SLKQ9H2G2 1235 aaPredicted RBP11.21□□□□□ -0.61
LINC00339-210ENST00000635675 VTA1Q9NP79 307 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 PXMP2Q9NR77 195 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 FAM184BQ9ULE4 1060 aa11.21□□□□□ -0.61
LINC00339-210ENST00000635675 CPLX1O14810 134 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 ADCY6O43306 1168 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 NR3C2P08235 984 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 PDE4DQ08499 809 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 RABEP1Q15276 862 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 ARHGEF16Q5VV41 709 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 EEPD1Q7L9B9 569 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 FCHSD1Q86WN1 690 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 TEX2Q8IWB9 1127 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 FBXO16Q8IX29 292 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-210ENST00000635675 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 CUL5Q93034 780 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 PDCD2LQ9BRP1 358 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 SLC26A6Q9BXS9 759 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 PDGFCQ9NRA1 345 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 FRMPD3Q5JV73 1810 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 LRRC37A2A6NM11 1700 aa11.2□□□□□ -0.62
LINC00339-210ENST00000635675 RBM47A0AV96 593 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 DUSP11O75319 330 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 LARGE1O95461 756 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 CTDNEP1O95476 244 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 RARBP10826 455 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 EIF2AK2P19525 551 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 ADCYAP1R1P41586 468 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 NAPAP54920 295 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 AKAP17AQ02040 695 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 TNFAIP2Q03169 654 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 SSRP1Q08945 709 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 PGM5Q15124 567 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 STXBP2Q15833 593 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 IQSEC1Q6DN90 963 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 CPLX2Q6PUV4 134 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 NOL8Q76FK4 1167 aaKnown RBP11.19□□□□□ -0.62
LINC00339-210ENST00000635675 VSIG10LQ86VR7 867 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 TRIM22Q8IYM9 498 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 NECAB1Q8N987 351 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 SMARCC2Q8TAQ2 1214 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 GTF3C6Q969F1 213 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 RIC8AQ9NPQ8 531 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 LIMCH1Q9UPQ0 1083 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 FRMPD4Q14CM0 1322 aa11.19□□□□□ -0.62
LINC00339-210ENST00000635675 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 ESYT2A0FGR8 921 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 SMCO2A6NFE2 343 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 EIF3JO75822 258 aaKnown RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 CDKL5O76039 1030 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 FARP2O94887 1054 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 DEXIO95424 95 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 SMPD1P17405 629 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 TMEM63BQ5T3F8 832 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 ARRDC4Q8NCT1 418 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 IL31RAQ8NI17 732 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 DIS3LQ8TF46 1054 aaKnown RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 LENG1Q96BZ8 264 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 PAWRQ96IZ0 340 aaKnown RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 ZMYND12Q9H0C1 365 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 GLT8D2Q9H1C3 349 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 XPNPEP3Q9NQH7 507 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 SH3GLB2Q9NR46 395 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 ADAMTS4O75173 837 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 RGS20O76081 388 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 PGK1P00558 417 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 COL6A1P12109 1028 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 ADCY7P51828 1080 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 NKX3-2P78367 333 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 ST3GAL1Q11201 340 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 LRRC41Q15345 812 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 UBE2SQ16763 222 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 DUSP28Q4G0W2 176 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 SCFD2Q8WU76 684 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 CCDC12Q8WUD4 166 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 WDR11Q9BZH6 1224 aa11.18□□□□□ -0.62
LINC00339-210ENST00000635675 UPF3AQ9H1J1 476 aaKnown RBP11.18□□□□□ -0.62
LINC00339-210ENST00000635675 KIAA1217Q5T5P2 1943 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 STK36Q9NRP7 1315 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 SYNRGQ9UMZ2 1314 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 DNM1LO00429 736 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 ADAMTS3O15072 1205 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 CTAGE5O15320 804 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 DTNBO60941 627 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 PTGS1P23219 599 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 CCND2P30279 289 aa11.17□□□□□ -0.62
LINC00339-210ENST00000635675 CLK2P49760 499 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms