RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 WDR11Q9BZH6 1224 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 AP5M1Q9H0R1 490 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 VAT1LQ9HCJ6 419 aa18.09■□□□□ 0.49
LINC00339-209ENST00000635450 MROH7Q68CQ1 1323 aa18.08■□□□□ 0.49
LINC00339-209ENST00000635450 RBM47A0AV96 593 aaKnown RBP18.08■□□□□ 0.48
LINC00339-209ENST00000635450 CCDC69A6NI79 296 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 TIMP1P01033 207 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 CD4P01730 458 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 PDE4DQ08499 809 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 FAM109BQ6ICB4 259 aaPredicted RBP18.08■□□□□ 0.48
LINC00339-209ENST00000635450 C16orf59Q7L2K0 433 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 RNPC3Q96LT9 517 aaKnown RBP18.08■□□□□ 0.48
LINC00339-209ENST00000635450 LY9Q9HBG7 655 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 MAD2L2Q9UI95 211 aa18.08■□□□□ 0.48
LINC00339-209ENST00000635450 DOCK5Q9H7D0 1870 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 ABCB11O95342 1321 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 KLRF2D3W0D1 207 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 RBAK-RBAKDNI3L0D1 243 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 SH2B2O14492 632 aaPredicted RBP18.07■□□□□ 0.48
LINC00339-209ENST00000635450 EPB41L2O43491 1005 aaKnown RBP18.07■□□□□ 0.48
LINC00339-209ENST00000635450 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
LINC00339-209ENST00000635450 CYP2C18P33260 490 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 GRM4Q14833 912 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 RASEFQ8IZ41 740 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 ZNF654Q8IZM8 581 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 SYTL5Q8TDW5 730 aaPredicted RBP18.07■□□□□ 0.48
LINC00339-209ENST00000635450 TAAR1Q96RJ0 339 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.07■□□□□ 0.48
LINC00339-209ENST00000635450 TRPV6Q9H1D0 765 aa18.07■□□□□ 0.48
LINC00339-209ENST00000635450 PALM3A6NDB9 673 aaPredicted RBP18.06■□□□□ 0.48
LINC00339-209ENST00000635450 B4GALT4O60513 344 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 DDAH1O94760 285 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 ACRP10323 421 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 CSF2RAP15509 400 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 HSPA4P34932 840 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 LIFRP42702 1097 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 TROAPQ12815 778 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 MFSD5Q6N075 450 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 DHX32Q7L7V1 743 aaKnown RBP18.06■□□□□ 0.48
LINC00339-209ENST00000635450 OR6J1Q8NGC5 347 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 CTCFLQ8NI51 663 aaPredicted RBP18.06■□□□□ 0.48
LINC00339-209ENST00000635450 TTYH1Q9H313 450 aaPredicted RBP18.06■□□□□ 0.48
LINC00339-209ENST00000635450 GPHNQ9NQX3 736 aaPredicted RBP18.06■□□□□ 0.48
LINC00339-209ENST00000635450 Q9Y3F1 56 aa18.06■□□□□ 0.48
LINC00339-209ENST00000635450 LOC102724159A0A0B4J2E5 919 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 KIF5BP33176 963 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 PURAQ00577 322 aaKnown RBP18.05■□□□□ 0.48
LINC00339-209ENST00000635450 PPP2R5BQ15173 497 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 PWP2Q15269 919 aaKnown RBP18.05■□□□□ 0.48
LINC00339-209ENST00000635450 SYNE3Q6ZMZ3 975 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 FBXO11Q86XK2 927 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 MTMR8Q96EF0 704 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 MAP3K14Q99558 947 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 LRRC2Q9BYS8 371 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 STXBP5LQ9Y2K9 1186 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 PRUNE2Q8WUY3 3088 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 CHD9Q3L8U1 2897 aa18.05■□□□□ 0.48
LINC00339-209ENST00000635450 A0A0C4DFX4 3053 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 TRIP12Q14669 1992 aaPredicted RBP18.04■□□□□ 0.48
LINC00339-209ENST00000635450 MYL3P08590 195 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 CALM1P0DP23 149 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 CALM2P0DP24 149 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 CALM3P0DP25 149 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 FGD1P98174 961 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 ADCK5Q3MIX3 580 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 ZNF697Q5TEC3 545 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 RGS22Q8NE09 1264 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 SCFD2Q8WU76 684 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 WNT8AQ9H1J5 351 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 TRMT13Q9NUP7 481 aaKnown RBP18.04■□□□□ 0.48
LINC00339-209ENST00000635450 SLC12A7Q9Y666 1083 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 MYO9BQ13459 2157 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 TET1Q8NFU7 2136 aa18.04■□□□□ 0.48
LINC00339-209ENST00000635450 TLR3O15455 904 aaKnown RBP18.03■□□□□ 0.48
LINC00339-209ENST00000635450 CYTH3O43739 400 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 EIF5BO60841 1220 aaKnown RBP18.03■□□□□ 0.48
LINC00339-209ENST00000635450 CABYRO75952 493 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 EIF2AK2P19525 551 aaKnown RBP18.03■□□□□ 0.48
LINC00339-209ENST00000635450 GNAQP50148 359 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 SMAD3P84022 425 aaKnown RBP18.03■□□□□ 0.48
LINC00339-209ENST00000635450 TRAF1Q13077 416 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 TMEM240Q5SV17 173 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 HOMER1Q86YM7 354 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 KCNB2Q92953 911 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 VWCEQ96DN2 955 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 JAKMIP1Q96N16 626 aaKnown RBP18.03■□□□□ 0.48
LINC00339-209ENST00000635450 PIGSQ96S52 555 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 MYL10Q9BUA6 226 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 NOC4LQ9BVI4 516 aaKnown RBP18.03■□□□□ 0.48
LINC00339-209ENST00000635450 SNX14Q9Y5W7 946 aa18.03■□□□□ 0.48
LINC00339-209ENST00000635450 PTPRSQ13332 1948 aa18.02■□□□□ 0.48
LINC00339-209ENST00000635450 CUL9Q8IWT3 2517 aa18.02■□□□□ 0.48
LINC00339-209ENST00000635450 GRXCR1A8MXD5 290 aa18.02■□□□□ 0.48
LINC00339-209ENST00000635450 ZBTB5O15062 677 aa18.02■□□□□ 0.48
LINC00339-209ENST00000635450 ZEB2O60315 1214 aa18.02■□□□□ 0.48
LINC00339-209ENST00000635450 CFBP00751 764 aa18.02■□□□□ 0.48
LINC00339-209ENST00000635450 TXNP10599 105 aaKnown RBP18.02■□□□□ 0.48
LINC00339-209ENST00000635450 PSMA5P28066 241 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms