RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-223ENST00000631247 MAFAQ8NHW3 353 aaPredicted RBP12.16□□□□□ -0.46
UBE3A-223ENST00000631247 MYLIPQ8WY64 445 aa12.16□□□□□ -0.46
UBE3A-223ENST00000631247 TTC14Q96N46 770 aa12.16□□□□□ -0.46
UBE3A-223ENST00000631247 MTIF3Q9H2K0 278 aaKnown RBP12.16□□□□□ -0.46
UBE3A-223ENST00000631247 PDGFCQ9NRA1 345 aa12.16□□□□□ -0.46
UBE3A-223ENST00000631247 GNEQ9Y223 722 aaKnown RBP12.16□□□□□ -0.46
UBE3A-223ENST00000631247 RAD50Q92878 1312 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 LOC102724159A0A0B4J2E5 919 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 C2orf72A6NCS6 295 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 HIP1O00291 1037 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 CTAGE5O15320 804 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 CSF2RAP15509 400 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 DNAJB2P25686 324 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 NT5C2P49902 561 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 CPT1AP50416 773 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 NKX3-2P78367 333 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 PDE4DQ08499 809 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 ZNF543Q08ER8 600 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 ITGA7Q13683 1181 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 PWP2Q15269 919 aaKnown RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 BRDTQ58F21 947 aaPredicted RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 SLC30A10Q6XR72 485 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 SMC5Q8IY18 1101 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 ZKSCAN3Q9BRR0 538 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 SEZ6LQ9BYH1 1024 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 WDR11Q9BZH6 1224 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 TTYH1Q9H313 450 aaPredicted RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 GPHNQ9NQX3 736 aaPredicted RBP12.15□□□□□ -0.46
UBE3A-223ENST00000631247 Q9Y3F1 56 aa12.15□□□□□ -0.46
UBE3A-223ENST00000631247 NEDD4P46934 1319 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 WDR19Q8NEZ3 1342 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 CHD7Q9P2D1 2997 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 B4DLN1 442 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 DHX16O60231 1041 aaKnown RBP12.14□□□□□ -0.47
UBE3A-223ENST00000631247 CYP2C18P33260 490 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 MRPL12P52815 198 aaKnown RBP12.14□□□□□ -0.47
UBE3A-223ENST00000631247 USH1GQ495M9 461 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 TAPT1Q6NXT6 567 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 OR6J1Q8NGC5 347 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 TIFAQ96CG3 184 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
UBE3A-223ENST00000631247 TRANK1O15050 2925 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 CD4P01730 458 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 GOLGA8HP0CJ92 632 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 ACRP10323 421 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 PTGS1P23219 599 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 PSMC6P62333 389 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 RPS6P62753 249 aaKnown RBP12.13□□□□□ -0.47
UBE3A-223ENST00000631247 NUCB1Q02818 461 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 PPP2R5BQ15173 497 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 IMMTQ16891 758 aaKnown RBP12.13□□□□□ -0.47
UBE3A-223ENST00000631247 DUSP28Q4G0W2 176 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 TMEM240Q5SV17 173 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 MORC4Q8TE76 937 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 OSBPL3Q9H4L5 887 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 IL23AQ9NPF7 189 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 MYH6P13533 1939 aa12.13□□□□□ -0.47
UBE3A-223ENST00000631247 B4GALT4O60513 344 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 KDM4AO75164 1064 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 MYL3P08590 195 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 SNHG28P0DPA3 235 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 CCL23P55773 120 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 FAM47CQ5HY64 1035 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 TMEM63BQ5T3F8 832 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 ZNF365Q70YC5 407 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 DGKHQ86XP1 1220 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 SLC43A3Q8NBI5 491 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 DNERQ8NFT8 737 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 SCFD2Q8WU76 684 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 CLEC4DQ8WXI8 215 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 UBAC1Q9BSL1 405 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 TRPV6Q9H1D0 765 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 CTNNA3Q9UI47 895 aa12.12□□□□□ -0.47
UBE3A-223ENST00000631247 B4E1Z4 1266 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBE3A-223ENST00000631247 PPP1R37O75864 691 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 FGBP02675 491 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 RAB30Q15771 203 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-223ENST00000631247 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 EXOC6Q8TAG9 804 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-223ENST00000631247 GAS2L1Q99501 681 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-223ENST00000631247 MTG1Q9BT17 334 aaPredicted RBP12.11□□□□□ -0.47
UBE3A-223ENST00000631247 KRT23Q9C075 422 aa12.11□□□□□ -0.47
UBE3A-223ENST00000631247 UBA5Q9GZZ9 404 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms