RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ADCYAP1R1P41586 468 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 GRM5P41594 1212 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 USP14P54578 494 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 PLA2G2CQ5R387 149 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 C9orf50Q5SZB4 431 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 SLC9C2Q5TAH2 1124 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 COL25A1Q9BXS0 654 aaPredicted RBP5.73□□□□□ -1.49
LINC00550-201ENST00000629293 TGIF2Q9GZN2 237 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 SCHIP1Q9P0W5 487 aaPredicted RBP5.73□□□□□ -1.49
LINC00550-201ENST00000629293 BRWD1Q9NSI6 2320 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 DOCK1Q14185 1865 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 CYP2D6P10635 497 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 THSD4Q6ZMP0 1018 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 DYNLL2Q96FJ2 89 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 LAMB1P07942 1786 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 GOLIM4O00461 696 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 PQBP1O60828 265 aaKnown RBP5.73□□□□□ -1.49
LINC00550-201ENST00000629293 MAP4K4O95819 1239 aaPredicted RBP5.73□□□□□ -1.49
LINC00550-201ENST00000629293 PGK2P07205 417 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 SHHQ15465 462 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 TRIM60Q495X7 471 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 FAM47AQ5JRC9 791 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 CATSPERGQ6ZRH7 1159 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 ATCAYQ86WG3 371 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 MYLIPQ8WY64 445 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 BADQ92934 168 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 LENG1Q96BZ8 264 aaPredicted RBP5.73□□□□□ -1.49
LINC00550-201ENST00000629293 MYO19Q96H55 970 aa5.73□□□□□ -1.49
LINC00550-201ENST00000629293 MOV10L1Q9BXT6 1211 aaKnown RBP5.73□□□□□ -1.49
LINC00550-201ENST00000629293 CYP2D7A0A087X1C5 515 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 PGK1P00558 417 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 COL6A1P12109 1028 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 ATP8B2P98198 1209 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 ATG4CQ96DT6 458 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 CRNKL1Q9BZJ0 848 aaKnown RBP5.72□□□□□ -1.49
LINC00550-201ENST00000629293 SMCHD1A6NHR9 2005 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 SPTBN5Q9NRC6 3674 aaKnown RBP5.72□□□□□ -1.49
LINC00550-201ENST00000629293 SLC15A5A6NIM6 579 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 CNMDO75829 334 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 DDIT3P35638 169 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 COG2Q14746 738 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 KDF1Q8NAX2 398 aaPredicted RBP5.72□□□□□ -1.49
LINC00550-201ENST00000629293 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 TRPV1Q8NER1 839 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 LPAR1Q92633 364 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 SNX21Q969T3 373 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 DMRTB1Q96MA1 342 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 GUCD1Q96NT3 240 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 SLC6A16Q9GZN6 736 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 SPATC1LQ9H0A9 340 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 KIAA1683Q9H0B3 1180 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 ACBD3Q9H3P7 528 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 DCTPP1Q9H773 170 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 ARMT1Q9H993 441 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 TMPRSS4Q9NRS4 437 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 FBXO28Q9NVF7 368 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 BRPF3Q9ULD4 1205 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 FCF1Q9Y324 198 aaKnown RBP5.72□□□□□ -1.49
LINC00550-201ENST00000629293 ALPK3Q96L96 1907 aa5.72□□□□□ -1.49
LINC00550-201ENST00000629293 A0A1W2PRG0 241 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 SMIM22K7EJ46 135 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 PRKAB2O43741 272 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 SHMT1P34896 483 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 RACK1P63244 317 aaKnown RBP5.71□□□□□ -1.49
LINC00550-201ENST00000629293 TLE2Q04725 743 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 ANKRD45Q5TZF3 282 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 CCDC129Q6ZRS4 1044 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 ZNF662Q6ZS27 426 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 ETFBKMTQ8IXQ9 262 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 MAFAQ8NHW3 353 aaPredicted RBP5.71□□□□□ -1.49
LINC00550-201ENST00000629293 USP6NLQ92738 828 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 CDK15Q96Q40 435 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 CDX2Q99626 313 aaPredicted RBP5.71□□□□□ -1.49
LINC00550-201ENST00000629293 KIF2CQ99661 725 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 HOXC10Q9NYD6 342 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 STIM2Q9P246 746 aa5.71□□□□□ -1.49
LINC00550-201ENST00000629293 CDV3Q9UKY7 258 aaKnown RBP5.71□□□□□ -1.49
LINC00550-201ENST00000629293 MSCO60682 206 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 COBLO75128 1261 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 S1PR4O95977 384 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 IFIT2P09913 472 aaKnown RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 FOSL2P15408 326 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 RAG1P15918 1043 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 ICA1Q05084 483 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 TBCELQ5QJ74 424 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 SSH3Q8TE77 659 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 ZDHHC1Q8WTX9 485 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 RNPC3Q96LT9 517 aaKnown RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 SLKQ9H2G2 1235 aaPredicted RBP5.71□□□□□ -1.5
LINC00550-201ENST00000629293 BOLA2Q9H3K6 86 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 ZNF532Q9HCE3 1301 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 MUC6Q6W4X9 2439 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 DNM1LO00429 736 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 CHGBP05060 677 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 FCER1AP12319 257 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 PDE6AP16499 860 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 GRB14Q14449 540 aa5.71□□□□□ -1.5
LINC00550-201ENST00000629293 SH3PXD2AQ5TCZ1 1133 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms