RNA–Protein interactions for RNA: ENST00000628689.2

TCF4-266, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-266ENST00000628689 CCDC144CPQ8IYA2 1237 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 SMRP1Q8NCR6 262 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 REPS2Q8NFH8 660 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 NOL10Q9BSC4 688 aaKnown RBP8.65□□□□□ -1.02
TCF4-266ENST00000628689 PHF7Q9BWX1 381 aaPredicted RBP8.65□□□□□ -1.02
TCF4-266ENST00000628689 SEMA4AQ9H3S1 761 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 INCENPQ9NQS7 918 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 FBXO28Q9NVF7 368 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 CLEC1BQ9P126 229 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 SERPINB13Q9UIV8 391 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 RIPK3Q9Y572 518 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 NLRC5Q86WI3 1866 aa8.65□□□□□ -1.02
TCF4-266ENST00000628689 CACNA1IQ9P0X4 2223 aa8.65□□□□□ -1.03
TCF4-266ENST00000628689 CEP295Q9C0D2 2601 aa8.65□□□□□ -1.03
TCF4-266ENST00000628689 NBNO60934 754 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 VAMP4O75379 141 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 CXCL10P02778 98 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 NUDT7P0C024 238 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 MCAMP43121 646 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 CCDC27Q2M243 656 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 LRRFIP1Q32MZ4 808 aaKnown RBP8.64□□□□□ -1.03
TCF4-266ENST00000628689 FAM47CQ5HY64 1035 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 ADGRA1Q86SQ6 560 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 FBXO11Q86XK2 927 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 SIAH1Q8IUQ4 282 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 CYP2W1Q8TAV3 490 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 HAUS7Q99871 368 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 HINFPQ9BQA5 517 aa8.64□□□□□ -1.03
TCF4-266ENST00000628689 USP15Q9Y4E8 981 aaPredicted RBP8.64□□□□□ -1.03
TCF4-266ENST00000628689 HELZ2Q9BYK8 2649 aaKnown RBP8.63□□□□□ -1.03
TCF4-266ENST00000628689 DCDC2BA2VCK2 349 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 SOBPA7XYQ1 873 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 GRM6O15303 877 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 CIAO1O76071 339 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
TCF4-266ENST00000628689 NDUFV1P49821 464 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 CLCN5P51795 746 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 COASYQ13057 564 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 IKBKEQ14164 716 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 WDR43Q15061 677 aaKnown RBP eCLIP8.63□□□□□ -1.03
TCF4-266ENST00000628689 ANGPT1Q15389 498 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 ZBTB33Q86T24 672 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 SPATA5Q8NB90 893 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 RUBCNQ92622 972 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 EHD4Q9H223 541 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 PDGFCQ9NRA1 345 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 LRP2BPQ9P2M1 347 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 Q9Y3F1 56 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 RALGAPA2Q2PPJ7 1873 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
TCF4-266ENST00000628689 PI15O43692 258 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 EFCAB14O75071 495 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 PURAQ00577 322 aaKnown RBP8.62□□□□□ -1.03
TCF4-266ENST00000628689 NAA16Q6N069 864 aaPredicted RBP8.62□□□□□ -1.03
TCF4-266ENST00000628689 KREMEN2Q8NCW0 462 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 AFAP1L1Q8TED9 768 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 XAGE2Q96GT9 111 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 VCPKMTQ9H867 229 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 PPP1R9AQ9ULJ8 1098 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 R4GN57 208 aa8.62□□□□□ -1.03
TCF4-266ENST00000628689 IGF2RP11717 2491 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 ZNF316A6NFI3 1004 aaPredicted RBP8.61□□□□□ -1.03
TCF4-266ENST00000628689 WDR46O15213 610 aaKnown RBP8.61□□□□□ -1.03
TCF4-266ENST00000628689 ZZEF1O43149 2961 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 BRD1O95696 1058 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 SELPP16109 830 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 SDHBP21912 280 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 PLCD1P51178 756 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 DYNLL1P63167 89 aaKnown RBP8.61□□□□□ -1.03
TCF4-266ENST00000628689 CNTN2Q02246 1040 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 IQSEC1Q6DN90 963 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 SNRNP48Q6IEG0 339 aaKnown RBP8.61□□□□□ -1.03
TCF4-266ENST00000628689 TAPT1Q6NXT6 567 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 NFRKBQ6P4R8 1299 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 LRRC8DQ7L1W4 858 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 CLEC10AQ8IUN9 316 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 CCDC105Q8IYK2 499 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 CRIPAKQ8N1N5 446 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 CTAGE1Q96RT6 745 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 MTG1Q9BT17 334 aaPredicted RBP8.61□□□□□ -1.03
TCF4-266ENST00000628689 TEX13BQ9BXU2 312 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 LMAN2LQ9H0V9 348 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 SMOC2Q9H3U7 446 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 TMX2Q9Y320 296 aa8.61□□□□□ -1.03
TCF4-266ENST00000628689 DDX49Q9Y6V7 483 aaKnown RBP8.61□□□□□ -1.03
TCF4-266ENST00000628689 MPHOSPH10O00566 681 aaKnown RBP8.6□□□□□ -1.03
TCF4-266ENST00000628689 CSPG5O95196 566 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 MYL3P08590 195 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 ATF7P17544 494 aaPredicted RBP8.6□□□□□ -1.03
TCF4-266ENST00000628689 IL15P40933 162 aaPredicted RBP8.6□□□□□ -1.03
TCF4-266ENST00000628689 DMWDQ09019 674 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 CAMK1Q14012 370 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.6□□□□□ -1.03
TCF4-266ENST00000628689 TTC6Q86TZ1 520 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 UBALD2Q8IYN6 164 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 MYOCDQ8IZQ8 938 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 ANKRD35Q8N283 1001 aa8.6□□□□□ -1.03
TCF4-266ENST00000628689 DTWD2Q8NBA8 298 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms