RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 CREB3L3Q68CJ9 461 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 FAM126BQ8IXS8 530 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 SAMD3Q8N6K7 520 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 SLC43A3Q8NBI5 491 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 OR6J1Q8NGC5 347 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 CCDC136Q96JN2 1154 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 TMEM87BQ96K49 555 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 POLR3EQ9NVU0 708 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 MAP3K20Q9NYL2 800 aaKnown RBP19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 COL20A1Q9P218 1284 aa19.96■□□□□ 0.79
SPTAN1-214ENST00000628614 PPP1R11O60927 126 aaPredicted RBP19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 TIMP1P01033 207 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 KIF5BP33176 963 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 GHRHRQ02643 423 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 ITGA7Q13683 1181 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 STXBP2Q15833 593 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 RNF20Q5VTR2 975 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 ARHGEF16Q5VV41 709 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 ZNF654Q8IZM8 581 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 TMTC2Q8N394 836 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 CTCFLQ8NI51 663 aaPredicted RBP19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 PIGSQ96S52 555 aa19.95■□□□□ 0.78
SPTAN1-214ENST00000628614 MYH6P13533 1939 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 PNMA6FA0A0J9YX94 578 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 OPLAHO14841 1288 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 CYTH3O43739 400 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 CDC45O75419 566 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 TXNP10599 105 aaKnown RBP19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 FPGSQ05932 587 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 SLC35G1Q2M3R5 365 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 NFXL1Q6ZNB6 911 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 PXMP2Q9NR77 195 aa19.94■□□□□ 0.78
SPTAN1-214ENST00000628614 CCDC69A6NI79 296 aa19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 SH2B2O14492 632 aaPredicted RBP19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 CD4P01730 458 aa19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 EIF2AK2P19525 551 aaKnown RBP19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 SHHQ15465 462 aa19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 C9orf50Q5SZB4 431 aa19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 GPHNQ9NQX3 736 aaPredicted RBP19.93■□□□□ 0.78
SPTAN1-214ENST00000628614 LAMA2P24043 3122 aaKnown RBP19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 KPNA6O60684 536 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 MYL3P08590 195 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 LIFRP42702 1097 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 PURAQ00577 322 aaKnown RBP19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 MFSD5Q6N075 450 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 SEPT14Q6ZU15 432 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 LZTS2Q9BRK4 669 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 MTG1Q9BT17 334 aaPredicted RBP19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 SPZ1Q9BXG8 430 aa19.92■□□□□ 0.78
SPTAN1-214ENST00000628614 A6NJR5 290 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 GCOM1H8Y6P7 765 aaPredicted RBP19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 EIF3JO75822 258 aaKnown RBP19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 ARIH2O95376 493 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 NR3C2P08235 984 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 POLR2MP0CAP2 368 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 CALM1P0DP23 149 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 CALM2P0DP24 149 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 CALM3P0DP25 149 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 SMARCA1P28370 1054 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 GNAQP50148 359 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 PSMC6P62333 389 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 CCDC62Q6P9F0 684 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 COPS5Q92905 334 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 GRIN2DO15399 1336 aa19.91■□□□□ 0.78
SPTAN1-214ENST00000628614 GH1P01241 217 aa19.9■□□□□ 0.78
SPTAN1-214ENST00000628614 PPIGQ13427 754 aaKnown RBP eCLIP19.9■□□□□ 0.786e-8■□□□□ 10.3
SPTAN1-214ENST00000628614 TMEM199Q8N511 208 aa19.9■□□□□ 0.78
SPTAN1-214ENST00000628614 DEFB123Q8N688 67 aa19.9■□□□□ 0.78
SPTAN1-214ENST00000628614 RRP36Q96EU6 259 aaKnown RBP19.9■□□□□ 0.78
SPTAN1-214ENST00000628614 PDCD2LQ9BRP1 358 aa19.9■□□□□ 0.78
SPTAN1-214ENST00000628614 SEC63Q9UGP8 760 aaKnown RBP19.9■□□□□ 0.78
SPTAN1-214ENST00000628614 B4GALT4O60513 344 aa19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 HOXA13P31271 388 aaPredicted RBP19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 EPHB4P54760 987 aa19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 LY6KQ17RY6 165 aa19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 RNPC3Q96LT9 517 aaKnown RBP19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 PPP1R12CQ9BZL4 782 aa19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 ALDH8A1Q9H2A2 487 aaPredicted RBP19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 SLC12A7Q9Y666 1083 aa19.89■□□□□ 0.77
SPTAN1-214ENST00000628614 NEFLP07196 543 aa19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 COL9A3Q14050 684 aaPredicted RBP19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 FAM109BQ6ICB4 259 aaPredicted RBP19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 PIBF1Q8WXW3 757 aa19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 NEK1Q96PY6 1258 aa19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 TRPV6Q9H1D0 765 aa19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 HIPK3Q9H422 1215 aa19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 MRVI1Q9Y6F6 885 aa19.88■□□□□ 0.77
SPTAN1-214ENST00000628614 SUPT20HL2P0C7V6 817 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 MYCLP12524 364 aaPredicted RBP19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 CCND2P30279 289 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 SMAD3P84022 425 aaKnown RBP19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 ARHGAP1Q07960 439 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 KRT32Q14532 448 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 PGM5Q15124 567 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 TSGA10IPQ3SY00 556 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 KCNV1Q6PIU1 500 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 Q7L0L9 218 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 SGMS1Q86VZ5 419 aa19.87■□□□□ 0.77
SPTAN1-214ENST00000628614 AFG1LQ8WV93 481 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms