RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 PIGSQ96S52 555 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 RMDN3Q96TC7 470 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
SSBP4-215ENST00000625926 ANO2Q9NQ90 1003 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 GPHNQ9NQX3 736 aaPredicted RBP12.59□□□□□ -0.39
SSBP4-215ENST00000625926 POLR3EQ9NVU0 708 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
SSBP4-215ENST00000625926 COL20A1Q9P218 1284 aa12.59□□□□□ -0.39
SSBP4-215ENST00000625926 PNMA6FA0A0J9YX94 578 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 PRC1O43663 620 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
SSBP4-215ENST00000625926 CD4P01730 458 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 HSD17B4P51659 736 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 NECTIN1Q15223 517 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 SLC35G1Q2M3R5 365 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 MFSD5Q6N075 450 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 SEPT14Q6ZU15 432 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 SKAP1Q86WV1 359 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 DEFB123Q8N688 67 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 TMEM87BQ96K49 555 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 MAP3K14Q99558 947 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 GRIN2DO15399 1336 aa12.58□□□□□ -0.4
SSBP4-215ENST00000625926 A6NJR5 290 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 OPLAHO14841 1288 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 CYTH3O43739 400 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 KPNA6O60684 536 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 EIF3JO75822 258 aaKnown RBP12.57□□□□□ -0.4
SSBP4-215ENST00000625926 MYL3P08590 195 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 KIF5BP33176 963 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 EPHB4P54760 987 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 PSMC6P62333 389 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 PURAQ00577 322 aaKnown RBP12.57□□□□□ -0.4
SSBP4-215ENST00000625926 GHRHRQ02643 423 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 RNF20Q5VTR2 975 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 NFXL1Q6ZNB6 911 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 ZNF654Q8IZM8 581 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 TMEM199Q8N511 208 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 CTCFLQ8NI51 663 aaPredicted RBP12.57□□□□□ -0.4
SSBP4-215ENST00000625926 COPS5Q92905 334 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 LZTS2Q9BRK4 669 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 MTG1Q9BT17 334 aaPredicted RBP12.57□□□□□ -0.4
SSBP4-215ENST00000625926 LY9Q9HBG7 655 aa12.57□□□□□ -0.4
SSBP4-215ENST00000625926 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
SSBP4-215ENST00000625926 CCDC69A6NI79 296 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 GCOM1H8Y6P7 765 aaPredicted RBP12.56□□□□□ -0.4
SSBP4-215ENST00000625926 SH2B2O14492 632 aaPredicted RBP12.56□□□□□ -0.4
SSBP4-215ENST00000625926 DDAH1O94760 285 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 ARIH2O95376 493 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 NR3C2P08235 984 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 EIF2AK2P19525 551 aaKnown RBP12.56□□□□□ -0.4
SSBP4-215ENST00000625926 SMARCA1P28370 1054 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 LIFRP42702 1097 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
SSBP4-215ENST00000625926 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 Q7L0L9 218 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 RNPC3Q96LT9 517 aaKnown RBP12.56□□□□□ -0.4
SSBP4-215ENST00000625926 PPP1R12CQ9BZL4 782 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 TRPV6Q9H1D0 765 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 PXMP2Q9NR77 195 aa12.56□□□□□ -0.4
SSBP4-215ENST00000625926 ALPK3Q96L96 1907 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 B4GALT4O60513 344 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 CDC45O75419 566 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 GH1P01241 217 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 CALM1P0DP23 149 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 CALM2P0DP24 149 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 CALM3P0DP25 149 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 HOXA13P31271 388 aaPredicted RBP12.55□□□□□ -0.4
SSBP4-215ENST00000625926 GNAQP50148 359 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 PPIGQ13427 754 aaKnown RBP eCLIP12.55□□□□□ -0.4
SSBP4-215ENST00000625926 LY6KQ17RY6 165 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 RRP36Q96EU6 259 aaKnown RBP12.55□□□□□ -0.4
SSBP4-215ENST00000625926 PDCD2LQ9BRP1 358 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 MYL10Q9BUA6 226 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 ALDH8A1Q9H2A2 487 aaPredicted RBP12.55□□□□□ -0.4
SSBP4-215ENST00000625926 HIPK3Q9H422 1215 aa12.55□□□□□ -0.4
SSBP4-215ENST00000625926 DDX41Q9UJV9 622 aaKnown RBP12.55□□□□□ -0.4
SSBP4-215ENST00000625926 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
SSBP4-215ENST00000625926 CSF2RAP15509 400 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 CYP2C18P33260 490 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 SMAD3P84022 425 aaKnown RBP12.54□□□□□ -0.4
SSBP4-215ENST00000625926 VSIG10LQ86VR7 867 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 AFG1LQ8WV93 481 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 NEK1Q96PY6 1258 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 SPZ1Q9BXG8 430 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 MTMR10Q9NXD2 777 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 SLC12A7Q9Y666 1083 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 MRVI1Q9Y6F6 885 aa12.54□□□□□ -0.4
SSBP4-215ENST00000625926 FRMPD3Q5JV73 1810 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 CASTP20810 708 aaKnown RBP12.53□□□□□ -0.4
SSBP4-215ENST00000625926 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
SSBP4-215ENST00000625926 ARHGAP1Q07960 439 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 LAMC2Q13753 1193 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 PGM5Q15124 567 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 NBPF20Q3BBV1 942 aa12.53□□□□□ -0.4
SSBP4-215ENST00000625926 FAM47CQ5HY64 1035 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms