RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 CFAP57Q96MR6 1250 aa6.17□□□□□ -1.42
ERCC6-213ENST00000624341 RAB3IPQ96QF0 476 aaPredicted RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 PUS7LQ9H0K6 701 aaKnown RBP6.17□□□□□ -1.42
ERCC6-213ENST00000624341 EIF4A3P38919 411 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 TOB2Q14106 344 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 EXOC3L4Q17RC7 722 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 LGSNQ5TDP6 509 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 BSPRYQ5W0U4 402 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 HIBCHQ6NVY1 386 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PLA2G4DQ86XP0 818 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC125Q86Z20 511 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PALM2Q8IXS6 379 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 DDX17Q92841 729 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 P2RX5Q93086 422 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 C8orf37Q96NL8 207 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 GREM2Q9H772 168 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ARPP21Q9UBL0 812 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 TPX2Q9ULW0 747 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ROBO2Q9HCK4 1378 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 SRGAP2O75044 1071 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 MMP1P03956 469 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 SLCO1A2P46721 670 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 DHX9Q08211 1270 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PHLDB3Q6NSJ2 640 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CFAP61Q8NHU2 1237 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 MPHOSPH6Q99547 160 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 GOLPH3LQ9H4A5 285 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 NHEJ1Q9H9Q4 299 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PRKAB2O43741 272 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ECM2O94769 699 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 SUN1O94901 812 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 TNNI1P19237 187 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CASP1P29466 404 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CYP4A11Q02928 519 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 STRN3Q13033 797 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PDCLQ13371 301 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 MESDQ14696 234 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 FAM133BQ5BKY9 247 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 RASIP1Q5U651 963 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CNBD1Q8NA66 436 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 MAIP1Q8WWC4 291 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 UPF1Q92900 1129 aaKnown RBP eCLIP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PANX2Q96RD6 677 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 RNF26Q9BY78 433 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ST7Q9NRC1 585 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 NOVA2Q9UNW9 492 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 POC1B-GALNT4F8VUJ3 575 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CASQ2O14958 399 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PDE8BO95263 885 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PHKG2P15735 406 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ATF7P17544 494 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 NR1D1P20393 614 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 RFC1P35251 1148 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CACNB1Q02641 598 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ZNF658Q5TYW1 1059 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CLEC17AQ6ZS10 378 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PPM1KQ8N3J5 372 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 P3H4Q92791 437 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC127Q96BQ5 260 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 KLHL29Q96CT2 875 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 PSTPIP2Q9H939 334 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ATP8A2Q9NTI2 1148 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 ZSWIM5Q9P217 1185 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 DAAM1Q9Y4D1 1078 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 OPHN1O60890 802 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 MAN1A1P33908 653 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 KRT31Q15323 416 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 DIXDC1Q155Q3 683 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 LRCH2Q5VUJ6 765 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 DHTKD1Q96HY7 919 aaPredicted RBP6.16□□□□□ -1.42
ERCC6-213ENST00000624341 BEGAINQ9BUH8 593 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 NUF2Q9BZD4 464 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 RIC8AQ9NPQ8 531 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 GGA1Q9UJY5 639 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 USP21Q9UK80 565 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 NFU1Q9UMS0 254 aa6.16□□□□□ -1.42
ERCC6-213ENST00000624341 KDM3AQ9Y4C1 1321 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 EIF3CLB5ME19 914 aaKnown RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 MFAP3LO75121 409 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 MAGEA9P43362 315 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 RPS8P62241 208 aaKnown RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 ZBED6P86452 979 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 PTPN12Q05209 780 aaKnown RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 POLA2Q14181 598 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 ZBTB38Q8NAP3 1195 aaPredicted RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 RETREG2Q8NC44 543 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 PAGE5Q96GU1 130 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 EIF3CQ99613 913 aaKnown RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 EFCC1Q9HA90 598 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 KIAA1024Q9UPX6 916 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 MORC2Q9Y6X9 1032 aaPredicted RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 ZBTB22O15209 634 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 GAS7O60861 476 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 IFNAR1P17181 557 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 NSMFQ6X4W1 530 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 GSPT2Q8IYD1 628 aaKnown RBP6.15□□□□□ -1.42
ERCC6-213ENST00000624341 CCDC87Q9NVE4 849 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 GINS2Q9Y248 185 aa6.15□□□□□ -1.42
ERCC6-213ENST00000624341 SRPRBQ9Y5M8 271 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms