RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
ATRX-213ENST00000624032 SMCHD1A6NHR9 2005 aa13.03□□□□□ -0.32
ATRX-213ENST00000624032 IKBKBO14920 756 aa13.02□□□□□ -0.32
ATRX-213ENST00000624032 KRT2P35908 639 aa13.02□□□□□ -0.32
ATRX-213ENST00000624032 CCDC174Q6PII3 467 aa13.02□□□□□ -0.32
ATRX-213ENST00000624032 ARMC9Q7Z3E5 817 aa13.02□□□□□ -0.32
ATRX-213ENST00000624032 RPAP3Q9H6T3 665 aaPredicted RBP13.02□□□□□ -0.32
ATRX-213ENST00000624032 FEZ2Q9UHY8 353 aaPredicted RBP13.02□□□□□ -0.32
ATRX-213ENST00000624032 ZSCAN12O43309 604 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 CBFA2T2O43439 604 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 SMCO2A6NFE2 343 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 IRF6O14896 467 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 CELF2O95319 508 aaKnown RBP13.02□□□□□ -0.33
ATRX-213ENST00000624032 YEATS4O95619 227 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 ATP2B1P20020 1258 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 OAS2P29728 719 aaKnown RBP13.02□□□□□ -0.33
ATRX-213ENST00000624032 USH1GQ495M9 461 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 MYSM1Q5VVJ2 828 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 FCHSD1Q86WN1 690 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 NOSTRINQ8IVI9 506 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
ATRX-213ENST00000624032 WDR46O15213 610 aaKnown RBP13.01□□□□□ -0.33
ATRX-213ENST00000624032 TBC1D8O95759 1140 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 USP14P54578 494 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 GPR161Q8N6U8 529 aaKnown RBP13.01□□□□□ -0.33
ATRX-213ENST00000624032 CHURC1Q8WUH1 139 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 LPAR1Q92633 364 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 SMARCE1Q969G3 411 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 SPTLC2O15270 562 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 ZNF202O95125 648 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 CC2D1AQ6P1N0 951 aaPredicted RBP13.01□□□□□ -0.33
ATRX-213ENST00000624032 KRBA2Q6ZNG9 492 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 BRAPQ7Z569 592 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 BLIDQ8IZY5 108 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 FOXP1Q9H334 677 aaPredicted RBP13.01□□□□□ -0.33
ATRX-213ENST00000624032 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 POLR3EQ9NVU0 708 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 PCDHA1Q9Y5I3 950 aa13.01□□□□□ -0.33
ATRX-213ENST00000624032 FLOT1O75955 427 aa13□□□□□ -0.33
ATRX-213ENST00000624032 ITGBL1O95965 494 aaPredicted RBP13□□□□□ -0.33
ATRX-213ENST00000624032 UBASH3AP57075 661 aa13□□□□□ -0.33
ATRX-213ENST00000624032 SMC1AQ14683 1233 aaKnown RBP13□□□□□ -0.33
ATRX-213ENST00000624032 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
ATRX-213ENST00000624032 RGS22Q8NE09 1264 aa13□□□□□ -0.33
ATRX-213ENST00000624032 TNFRSF25Q93038 417 aa13□□□□□ -0.33
ATRX-213ENST00000624032 OPTNQ96CV9 577 aa13□□□□□ -0.33
ATRX-213ENST00000624032 WNK4Q96J92 1243 aa13□□□□□ -0.33
ATRX-213ENST00000624032 TMEM260Q9NX78 707 aa13□□□□□ -0.33
ATRX-213ENST00000624032 PCDHA4Q9UN74 947 aa13□□□□□ -0.33
ATRX-213ENST00000624032 FANCGO15287 622 aa13□□□□□ -0.33
ATRX-213ENST00000624032 SERPINC1P01008 464 aa13□□□□□ -0.33
ATRX-213ENST00000624032 ATP1A3P13637 1013 aa13□□□□□ -0.33
ATRX-213ENST00000624032 GJA5P36382 358 aa13□□□□□ -0.33
ATRX-213ENST00000624032 TOB1P50616 345 aaPredicted RBP13□□□□□ -0.33
ATRX-213ENST00000624032 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
ATRX-213ENST00000624032 CHADLQ6NUI6 762 aa13□□□□□ -0.33
ATRX-213ENST00000624032 ERO1BQ86YB8 467 aa13□□□□□ -0.33
ATRX-213ENST00000624032 ARFGAP3Q9NP61 516 aa13□□□□□ -0.33
ATRX-213ENST00000624032 C19orf81C9J6K1 198 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 WNT7AO00755 349 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 SASH3O75995 380 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 TREML2Q5T2D2 321 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 CST9Q5W186 159 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 PIK3AP1Q6ZUJ8 805 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 FAM160B2Q86V87 743 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 FBXO11Q86XK2 927 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 CCDC148Q8NFR7 591 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 SLF1Q9BQI6 1058 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 ZMYND12Q9H0C1 365 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 GBA2Q9HCG7 927 aaPredicted RBP12.99□□□□□ -0.33
ATRX-213ENST00000624032 TMOD4Q9NZQ9 345 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
ATRX-213ENST00000624032 PCDHA6Q9UN73 950 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 PCDHA8Q9Y5H6 950 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 CALML3P27482 149 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 UBE2SQ16763 222 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 SLC10A4Q96EP9 437 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 BRMS1Q9HCU9 246 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 ZCCHC17Q9NP64 241 aaKnown RBP12.99□□□□□ -0.33
ATRX-213ENST00000624032 GOLGA6L9A6NEM1 432 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 M0R2N6 131 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 CASQ1P31415 396 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 PPATQ06203 517 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 MAPK8IP2Q13387 824 aaPredicted RBP12.99□□□□□ -0.33
ATRX-213ENST00000624032 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 GADL1Q6ZQY3 521 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 AMNQ9BXJ7 453 aa12.99□□□□□ -0.33
ATRX-213ENST00000624032 RANBP17Q9H2T7 1088 aaKnown RBP12.99□□□□□ -0.33
ATRX-213ENST00000624032 GPBP1L1Q9HC44 474 aaPredicted RBP12.99□□□□□ -0.33
ATRX-213ENST00000624032 PTPRFP10586 1907 aa12.98□□□□□ -0.33
ATRX-213ENST00000624032 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
ATRX-213ENST00000624032 CMA1P23946 247 aa12.98□□□□□ -0.33
ATRX-213ENST00000624032 MYL5Q02045 173 aa12.98□□□□□ -0.33
ATRX-213ENST00000624032 ZSCAN26Q16670 478 aa12.98□□□□□ -0.33
ATRX-213ENST00000624032 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
ATRX-213ENST00000624032 CPXCR1Q8N123 301 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms