RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.06□□□□□ -1.12
CDKL5-204ENST00000623364 ADGRD2Q7Z7M1 963 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 TLK2Q86UE8 772 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 ZDHHC14Q8IZN3 488 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 SLC39A7Q92504 469 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 LRIG1Q96JA1 1093 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 MAP3K2Q9Y2U5 619 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 SIT1Q9Y3P8 196 aa8.06□□□□□ -1.12
CDKL5-204ENST00000623364 TRIP12Q14669 1992 aaPredicted RBP8.06□□□□□ -1.12
CDKL5-204ENST00000623364 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 SPDYE4A6NLX3 237 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 LAMTOR5O43504 91 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 LILRB5O75023 590 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 GDF11O95390 407 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 RETP07949 1114 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 SELPP16109 830 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 TNFAIP2Q03169 654 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 CCDC57Q2TAC2 916 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 SLF2Q8IX21 1173 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 MAML2Q8IZL2 1156 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-204ENST00000623364 PLCD3Q8N3E9 789 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 FIBCD1Q8N539 461 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 TDRD5Q8NAT2 981 aaKnown RBP8.05□□□□□ -1.12
CDKL5-204ENST00000623364 ZBTB44Q8NCP5 570 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 CAGE1Q8TC20 777 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 UBL7Q96S82 380 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-204ENST00000623364 TRIM34Q9BYJ4 488 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 KIAA1683Q9H0B3 1180 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 TLE6Q9H808 572 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 TBC1D17Q9HA65 648 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 GPR108Q9NPR9 543 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.05□□□□□ -1.12
CDKL5-204ENST00000623364 PI4KBQ9UBF8 816 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 RALGAPA1Q6GYQ0 2036 aa8.05□□□□□ -1.12
CDKL5-204ENST00000623364 MCAMP43121 646 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 CSTF1Q05048 431 aaKnown RBP8.04□□□□□ -1.12
CDKL5-204ENST00000623364 TDGQ13569 410 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 GPNMBQ14956 572 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 TCTN1Q2MV58 587 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
CDKL5-204ENST00000623364 AASDHQ4L235 1098 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-204ENST00000623364 CC2D1BQ5T0F9 858 aaKnown RBP8.04□□□□□ -1.12
CDKL5-204ENST00000623364 LRRC8DQ7L1W4 858 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 ZNF594Q96JF6 807 aaPredicted RBP8.04□□□□□ -1.12
CDKL5-204ENST00000623364 NECTIN4Q96NY8 510 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 TANGO6Q9C0B7 1094 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 S1PR5Q9H228 398 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 DLGAP2Q9P1A6 1054 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 WNT16Q9UBV4 365 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 DUSP12Q9UNI6 340 aa8.04□□□□□ -1.12
CDKL5-204ENST00000623364 ASTN1O14525 1302 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 MYH2Q9UKX2 1941 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 POTEMA6NI47 508 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 NEURL1BA8MQ27 555 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 DYNC1LI2O43237 492 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-204ENST00000623364 NBNO60934 754 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 BTDP43251 543 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 ZNF252P-AS1Q0IIN9 211 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 CAMK1Q14012 370 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 SHROOM1Q2M3G4 852 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-204ENST00000623364 POTEGQ6S5H5 508 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 ZNF467Q7Z7K2 595 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-204ENST00000623364 MAGEB6Q8N7X4 407 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 ZNF513Q8N8E2 541 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-204ENST00000623364 ATP8B4Q8TF62 1192 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 HNRNPLLQ8WVV9 542 aaKnown RBP8.03□□□□□ -1.12
CDKL5-204ENST00000623364 SPATA6Q9NWH7 488 aaPredicted RBP8.03□□□□□ -1.12
CDKL5-204ENST00000623364 ACACAQ13085 2346 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 TICRRQ7Z2Z1 1910 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 WDFY3Q8IZQ1 3526 aa8.03□□□□□ -1.12
CDKL5-204ENST00000623364 WDR46O15213 610 aaKnown RBP8.02□□□□□ -1.13
CDKL5-204ENST00000623364 UPP2O95045 317 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 TOP3BO95985 862 aaKnown RBP8.02□□□□□ -1.13
CDKL5-204ENST00000623364 NOVA1P51513 510 aaKnown RBP8.02□□□□□ -1.13
CDKL5-204ENST00000623364 TROAPQ12815 778 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 LPAL2Q16609 132 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 SNRNP48Q6IEG0 339 aaKnown RBP8.02□□□□□ -1.13
CDKL5-204ENST00000623364 CES5AQ6NT32 575 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 NFRKBQ6P4R8 1299 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 IL17RAQ96F46 866 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 DDX11Q96FC9 970 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 MKNK1Q9BUB5 465 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 APOL5Q9BWW9 433 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 PLVAPQ9BX97 442 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 POLR3EQ9NVU0 708 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 PLAGL2Q9UPG8 496 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 GNEQ9Y223 722 aaKnown RBP8.02□□□□□ -1.13
CDKL5-204ENST00000623364 NEUROG3Q9Y4Z2 214 aa8.02□□□□□ -1.13
CDKL5-204ENST00000623364 MYH13Q9UKX3 1938 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 FBN2P35556 2912 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 LAMA5O15230 3695 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 KRBA1A5PL33 1030 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 HOXB8P17481 243 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-204ENST00000623364 COPB2P35606 906 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 TECP42680 631 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 RBM10P98175 930 aaKnown RBP8.01□□□□□ -1.13
CDKL5-204ENST00000623364 PTPN11Q06124 597 aaPredicted RBP8.01□□□□□ -1.13
CDKL5-204ENST00000623364 PHLDB3Q6NSJ2 640 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 ANKRD54Q6NXT1 300 aa8.01□□□□□ -1.13
CDKL5-204ENST00000623364 KSR2Q6VAB6 950 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms