RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HOXC12P31275 282 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 LIMS1P48059 325 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 ZC3H6P61129 1189 aaKnown RBP7.09□□□□□ -1.27
BRCA1-229ENST00000621897 WWC2Q6AWC2 1192 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 DENND5AQ6IQ26 1287 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 CABP7Q86V35 215 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 TEX2Q8IWB9 1127 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 BTG4Q9NY30 223 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.09□□□□□ -1.27
BRCA1-229ENST00000621897 MARCH2Q9P0N8 246 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 SIT1Q9Y3P8 196 aa7.09□□□□□ -1.27
BRCA1-229ENST00000621897 NTRK1P04629 796 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 ATF2P15336 505 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 MC3RP41968 323 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 GFRA1P56159 465 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 CNKSR3Q6P9H4 555 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 TMEM145Q8NBT3 493 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 NETO2Q8NC67 525 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 USP33Q8TEY7 942 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 C1orf159Q96HA4 380 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 FBXL7Q9UJT9 491 aa7.08□□□□□ -1.28
BRCA1-229ENST00000621897 A0A1W2PQU0 124 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 FPR2P25090 351 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 KCNJ6P48051 423 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 AFF3P51826 1226 aaKnown RBP7.07□□□□□ -1.28
BRCA1-229ENST00000621897 PPP2R2AP63151 447 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 VMACQ2NL98 169 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 TCERG1LQ5VWI1 586 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 EPN3Q9H201 632 aa7.07□□□□□ -1.28
BRCA1-229ENST00000621897 MEFVO15553 781 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-229ENST00000621897 ASGR2P07307 311 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 LCP1P13796 627 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 PMLP29590 882 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 RAB33AQ14088 237 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 E4F1Q66K89 784 aaPredicted RBP7.06□□□□□ -1.28
BRCA1-229ENST00000621897 NLRP10Q86W26 655 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 PPIL6Q8IXY8 311 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 ALG3Q92685 438 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 DIO2Q92813 273 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 TSPAN17Q96FV3 270 aa7.06□□□□□ -1.28
BRCA1-229ENST00000621897 TRIM13O60858 407 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 CPP00450 1065 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 PLA2G1BP04054 148 aaKnown RBP7.05□□□□□ -1.28
BRCA1-229ENST00000621897 PFKLP17858 780 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 BCL6P41182 706 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 TMEM151BQ8IW70 566 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 RCBTB1Q8NDN9 531 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 PEX11GQ96HA9 241 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 PWWP2AQ96N64 755 aa7.05□□□□□ -1.28
BRCA1-229ENST00000621897 C22orf46C9J442 243 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 INHBBP09529 407 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 RPL11P62913 178 aaKnown RBP7.04□□□□□ -1.28
BRCA1-229ENST00000621897 TESK1Q15569 626 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 TARBP2Q15633 366 aaKnown RBP7.04□□□□□ -1.28
BRCA1-229ENST00000621897 SLC35F1Q5T1Q4 408 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 ACBD5Q5T8D3 534 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-229ENST00000621897 IQCEQ6IPM2 695 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 Q8N1Y9 231 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 CCDC140Q96MF4 163 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 IER2Q9BTL4 223 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 NUDT5Q9UKK9 219 aa7.04□□□□□ -1.28
BRCA1-229ENST00000621897 TIMM13Q9Y5L4 95 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-229ENST00000621897 STK10O94804 968 aaKnown RBP7.03□□□□□ -1.28
BRCA1-229ENST00000621897 NCAM1P13591 858 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 BMP7P18075 431 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 LTBRP36941 435 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 FOXO4P98177 505 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 KCNAB2Q13303 367 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 TTLL10Q6ZVT0 673 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 RNF38Q9H0F5 515 aa7.03□□□□□ -1.28
BRCA1-229ENST00000621897 AGRPO00253 132 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 SGSM2O43147 1006 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 DLX3O60479 287 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 SLC9A5Q14940 896 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 CEP68Q76N32 757 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 TP53I13Q8NBR0 393 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-229ENST00000621897 KCNC2Q96PR1 638 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 TRIM55Q9BYV6 548 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 TANGO6Q9C0B7 1094 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 ARHGEF4Q9NR80 690 aa7.02□□□□□ -1.29
BRCA1-229ENST00000621897 FFAR3O14843 346 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 MAP4K2Q12851 820 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 VWA3BQ502W6 1294 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 B3GNT8Q7Z7M8 397 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 DCP2Q8IU60 420 aaKnown RBP7.01□□□□□ -1.29
BRCA1-229ENST00000621897 CKAP2LQ8IYA6 745 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 MARCH10Q8NA82 808 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-229ENST00000621897 FNIP1Q8TF40 1166 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 NOX5Q96PH1 765 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 PARD6AQ9NPB6 346 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 FAN1Q9Y2M0 1017 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 MSRB2Q9Y3D2 182 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 PCDHA2Q9Y5H9 948 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 X6R8D5 127 aa7.01□□□□□ -1.29
BRCA1-229ENST00000621897 KRTAP9-7A8MTY7 169 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 MYO1BO43795 1136 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 ZBTB7AO95365 584 aa7□□□□□ -1.29
BRCA1-229ENST00000621897 HOXA5P20719 270 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms