RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 WRNIP1Q96S55 665 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 XPO4Q9C0E2 1151 aaKnown RBP31.29■■■□□ 2.6
FMR1-219ENST00000621453 NFE2L3Q9Y4A8 694 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 ABCB11O95342 1321 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 CFBP00751 764 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 GRB10Q13322 594 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 KRT79Q5XKE5 535 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 TRMT44Q8IYL2 757 aaKnown RBP31.29■■■□□ 2.6
FMR1-219ENST00000621453 SMYD4Q8IYR2 804 aaPredicted RBP31.29■■■□□ 2.6
FMR1-219ENST00000621453 PRPF38AQ8NAV1 312 aaKnown RBP31.29■■■□□ 2.6
FMR1-219ENST00000621453 SLF1Q9BQI6 1058 aa31.29■■■□□ 2.6
FMR1-219ENST00000621453 PPP1R3GB7ZBB8 358 aa31.28■■■□□ 2.6
FMR1-219ENST00000621453 PTGS1P23219 599 aa31.28■■■□□ 2.6
FMR1-219ENST00000621453 ZNF658Q5TYW1 1059 aaPredicted RBP31.28■■■□□ 2.6
FMR1-219ENST00000621453 LDHDQ86WU2 507 aa31.28■■■□□ 2.6
FMR1-219ENST00000621453 SNX29Q8TEQ0 813 aa31.28■■■□□ 2.6
FMR1-219ENST00000621453 MED15Q96RN5 788 aa31.28■■■□□ 2.6
FMR1-219ENST00000621453 POLR2AP24928 1970 aaKnown RBP31.28■■■□□ 2.6
FMR1-219ENST00000621453 DDNO94850 711 aaPredicted RBP31.27■■■□□ 2.6
FMR1-219ENST00000621453 USP14P54578 494 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 MTMR2Q13614 643 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 Q4G0T1 1027 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 GJA10Q969M2 543 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 CDK5RAP3Q96JB5 506 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 RNF181Q9P0P0 153 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 GCOM1H8Y6P7 765 aaPredicted RBP31.27■■■□□ 2.6
FMR1-219ENST00000621453 POLR2MP0CAP2 368 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 KCNB1Q14721 858 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 SLFN12Q8IYM2 578 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 PNMA5Q96PV4 448 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 WDR18Q9BV38 432 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 KCNF1Q9H3M0 494 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 AS3MTQ9HBK9 375 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 STK17AQ9UEE5 414 aa31.27■■■□□ 2.6
FMR1-219ENST00000621453 ZNF500O60304 480 aaPredicted RBP31.26■■■□□ 2.59
FMR1-219ENST00000621453 CYP3A4P08684 503 aa31.26■■■□□ 2.59
FMR1-219ENST00000621453 CIITAP33076 1130 aa31.26■■■□□ 2.59
FMR1-219ENST00000621453 DGKZQ13574 1117 aa31.26■■■□□ 2.59
FMR1-219ENST00000621453 KLHL10Q6JEL2 608 aa31.26■■■□□ 2.59
FMR1-219ENST00000621453 FCHSD1Q86WN1 690 aa31.26■■■□□ 2.59
FMR1-219ENST00000621453 TBC1D5Q92609 795 aa31.26■■■□□ 2.59
FMR1-219ENST00000621453 ZKSCAN4Q969J2 545 aaPredicted RBP31.26■■■□□ 2.59
FMR1-219ENST00000621453 ICAM1P05362 532 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 AMPD3Q01432 767 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 SEMA3FQ13275 785 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 PRR16Q569H4 304 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 PICK1Q9NRD5 415 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 EMILIN3Q9NT22 766 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 TBX3O15119 743 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 KLRC4O43908 158 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 SERPINC1P01008 464 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 VCAM1P19320 739 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 SPP2Q13103 211 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 CCDC144BQ3MJ40 725 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 C7orf25Q9BPX7 421 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 TANGO6Q9C0B7 1094 aa31.25■■■□□ 2.59
FMR1-219ENST00000621453 PITPNM2Q9BZ72 1349 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 SYNRGQ9UMZ2 1314 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 ZNF18P17022 549 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 PTPRAP18433 802 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 KMT5BQ4FZB7 885 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 ETNPPLQ8TBG4 499 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 NUDT12Q9BQG2 462 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 TRIM9Q9C026 710 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 BLOC1S4Q9NUP1 217 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 CCPG1Q9ULG6 757 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 FZD1Q9UP38 647 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 ZNF536O15090 1300 aa31.24■■■□□ 2.59
FMR1-219ENST00000621453 FAM86B1E9PN63 330 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 CBFA2T2O43439 604 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 FAM86B2P0C5J1 330 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 UBASH3AP57075 661 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 LENG9Q96B70 501 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 KLRG1Q96E93 195 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 SSC5DA1L4H1 1573 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 BACE1P56817 501 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 TMEM119Q4V9L6 283 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 SPATA1Q5VX52 437 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 SV2BQ7L1I2 683 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 ZNF280CQ8ND82 737 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 LARP4BQ92615 738 aaKnown RBP31.23■■■□□ 2.59
FMR1-219ENST00000621453 AGBL1Q96MI9 1066 aa31.23■■■□□ 2.59
FMR1-219ENST00000621453 ADARB2Q9NS39 739 aaKnown RBP31.23■■■□□ 2.59
FMR1-219ENST00000621453 PHIPQ8WWQ0 1821 aa31.22■■■□□ 2.59
FMR1-219ENST00000621453 RHOBTB3O94955 611 aa31.22■■■□□ 2.59
FMR1-219ENST00000621453 YBX3P16989 372 aaKnown RBP eCLIP31.22■■■□□ 2.59
FMR1-219ENST00000621453 STX17P56962 302 aa31.22■■■□□ 2.59
FMR1-219ENST00000621453 SUPT20HL1Q3ZLR7 823 aa31.22■■■□□ 2.59
FMR1-219ENST00000621453 RPAP3Q9H6T3 665 aaPredicted RBP31.22■■■□□ 2.59
FMR1-219ENST00000621453 FLOT1O75955 427 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 ZNF76P36508 570 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 EHMT1Q9H9B1 1298 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 CTNND2Q9UQB3 1225 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 GDAQ9Y2T3 454 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 KDM3AQ9Y4C1 1321 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 HYIQ5T013 277 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 UIMC1Q96RL1 719 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 SLC38A10Q9HBR0 1119 aa31.21■■■□□ 2.59
FMR1-219ENST00000621453 SAMSN1Q9NSI8 373 aaKnown RBP31.21■■■□□ 2.59
FMR1-219ENST00000621453 PPP1R9AQ9ULJ8 1098 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms