RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 SCYL2Q6P3W7 929 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 CABP7Q86V35 215 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 EFHD1Q9BUP0 239 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 HAUS4Q9H6D7 363 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 STRN3Q13033 797 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 CHAMP1Q96JM3 812 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 SPAG7O75391 227 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 KRT19P08727 400 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 TIMM10P62072 90 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 NBPF20Q3BBV1 942 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 RAPH1Q70E73 1250 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 ELAC2Q9BQ52 826 aaKnown RBP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 WARS2Q9UGM6 360 aaKnown RBP10.76□□□□□ -0.69
COL4A6-210ENST00000621266 USP19O94966 1318 aa10.76□□□□□ -0.69
COL4A6-210ENST00000621266 CASP8Q14790 479 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 FAM47CQ5HY64 1035 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 CCHCR1Q8TD31 782 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ABCB6Q9NP58 842 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 EPN1Q9Y6I3 576 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 PLXNC1O60486 1568 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 PNMA6AP0CW24 399 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 STAT1P42224 750 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 POLR2FP61218 127 aaKnown RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 RINLQ6ZS11 566 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 CPXCR1Q8N123 301 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 MAML1Q92585 1016 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 USP28Q96RU2 1077 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ARHGEF10LQ9HCE6 1279 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 PCDHB13Q9Y5F0 798 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ENO4A6NNW6 628 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 KCNA4P22459 653 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 MRPS15P82914 257 aaKnown RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ART3Q13508 389 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 USH1GQ495M9 461 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ARHGEF18Q6ZSZ5 1173 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 NSMCE1Q8WV22 266 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 HNRNPCL2B2RXH8 293 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 PPEF1O14829 653 aaPredicted RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 HNRNPCL1O60812 293 aaKnown RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 PLTPP55058 493 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 SLMAPQ14BN4 828 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 TTBK2Q6IQ55 1244 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 TRAIPQ9BWF2 469 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ZNF148Q9UQR1 794 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 ARHGEF5Q12774 1597 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 SUPT3HO75486 399 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 TOM1L1O75674 476 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 GARSP41250 739 aaKnown RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 HAUS3Q68CZ6 603 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 CCDC124Q96CT7 223 aaKnown RBP10.75□□□□□ -0.69
COL4A6-210ENST00000621266 TSC22D4Q9Y3Q8 395 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 DAAM1Q9Y4D1 1078 aa10.75□□□□□ -0.69
COL4A6-210ENST00000621266 KIAA0232Q92628 1395 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 CHGBP05060 677 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 STX1BP61266 288 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PKP1Q13835 747 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PPP2R5EQ16537 467 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 ANKRD35Q8N283 1001 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 EXOC7Q9UPT5 735 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 AOX1Q06278 1338 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PHLPP2Q6ZVD8 1323 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 hCG_1642624A0A1W2PR95 340 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 FLOT2Q14254 428 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 CYP4F22Q6NT55 531 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 ZNF496Q96IT1 587 aaPredicted RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 FAM227BQ96M60 508 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 DBNDD2Q9BQY9 259 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 ARMT1Q9H993 441 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 LRWD1Q9UFC0 647 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 STRIP2Q9ULQ0 834 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 BRD1O95696 1058 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 CASP14P31944 242 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 KRT40Q6A162 431 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 RAPGEF5Q92565 580 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 NAP1L4Q99733 375 aaKnown RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 DBNLQ9UJU6 430 aaKnown RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 ERVV-2B6SEH9 535 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 BFSP1Q12934 665 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PDCLQ13371 301 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 DALRD3Q5D0E6 543 aaKnown RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 RGS9BPQ6ZS82 235 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 XAGE2Q96GT9 111 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 SPZ1Q9BXG8 430 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 EIF4A1P60842 406 aaKnown RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 GCKRQ14397 625 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 CNOT10Q9H9A5 744 aaKnown RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PDE1BQ01064 536 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 DHX9Q08211 1270 aaKnown RBP10.74□□□□□ -0.69
COL4A6-210ENST00000621266 PARP9Q8IXQ6 854 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 CHMP6Q96FZ7 201 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 TUBB6Q9BUF5 446 aa10.74□□□□□ -0.69
COL4A6-210ENST00000621266 LMNAP02545 664 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 NPR1P16066 1061 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 PRPF38AQ8NAV1 312 aaKnown RBP10.73□□□□□ -0.69
COL4A6-210ENST00000621266 TGFBRAP1Q8WUH2 860 aa10.73□□□□□ -0.69
COL4A6-210ENST00000621266 MAGOHBQ96A72 148 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms