RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 IRF7Q92985 503 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 FUBP3Q96I24 572 aaKnown RBP eCLIP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 CELF4Q9BZC1 486 aaKnown RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 AKTIPQ9H8T0 292 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 GPR27Q9NS67 375 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 SF3B6Q9Y3B4 125 aaKnown RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA9Q9Y5G4 932 aaKnown RBP5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA3Q9Y5H0 932 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHGA2Q9Y5H1 932 aa5.02□□□□□ -1.61
LRRC39-204ENST00000620882 PTPDC1A2A3K4 754 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 GAS2O43903 313 aaKnown RBP5.01□□□□□ -1.61
LRRC39-204ENST00000620882 CAND2O75155 1236 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 BMP3P12645 472 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 NOS3P29474 1203 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 DNM2P50570 870 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 GALEQ14376 348 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 RTP2Q5QGT7 225 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 ACBD5Q5T8D3 534 aaPredicted RBP5.01□□□□□ -1.61
LRRC39-204ENST00000620882 ANKLE2Q86XL3 938 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 IFNL3Q8IZI9 196 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 CHST14Q8NCH0 376 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 USP33Q8TEY7 942 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 IPPKQ9H8X2 491 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 PCDHA2Q9Y5H9 948 aa5.01□□□□□ -1.61
LRRC39-204ENST00000620882 B4E1Z4 1266 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 K7ESF4 209 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 MEFVO15553 781 aaPredicted RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 RFPL1O75677 317 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 FAM87AP0C7U9 286 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 PF4V1P10720 104 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 LTBRP36941 435 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 IREB2P48200 963 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 POU4F1Q01851 419 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 SART3Q15020 963 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 EPM2AIP1Q7L775 607 aaPredicted RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 NEDD1Q8NHV4 660 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 TCTN2Q96GX1 697 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 OXSMQ9NWU1 459 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 PRR13Q9NZ81 148 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 B4GALT6Q9UBX8 382 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 DDX20Q9UHI6 824 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 GAS7O60861 476 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 LDHAP00338 332 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 MYL1P05976 194 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 ADMP35318 185 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 LSSP48449 732 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 HTRA3P83110 453 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 PAK1Q13153 545 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 TRIM28Q13263 835 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 TESK1Q15569 626 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 BROXQ5VW32 411 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 ZPBP2Q6X784 338 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 CPNE8Q86YQ8 564 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 GATA6Q92908 595 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 AHCYL2Q96HN2 611 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 MEGF10Q96KG7 1140 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 LUC7LQ9NQ29 371 aaKnown RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 PRDM5Q9NQX1 630 aaPredicted RBP5□□□□□ -1.61
LRRC39-204ENST00000620882 AP5S1Q9NUS5 200 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 OBP2AQ9NY56 170 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 USP21Q9UK80 565 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 ZNF281Q9Y2X9 895 aa5□□□□□ -1.61
LRRC39-204ENST00000620882 SART1O43290 800 aaKnown RBP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 VAV1P15498 845 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 MAP4P27816 1152 aaKnown RBP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 RXRBP28702 533 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 SEPHS1P49903 392 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 KLF1Q13351 362 aaPredicted RBP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 PPP4R4Q6NUP7 873 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 DGKHQ86XP1 1220 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 KIF18BQ86Y91 864 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 TEX2Q8IWB9 1127 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 CPA6Q8N4T0 437 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 SVOPQ8N4V2 548 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 C1orf162Q8NEQ5 155 aaPredicted RBP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 DCAF11Q8TEB1 546 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 MYRFLQ96LU7 910 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 KCNJ15Q99712 375 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 MENTQ9BUN1 341 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 DUSP15Q9H1R2 295 aaPredicted RBP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 TOPORSQ9NS56 1045 aaPredicted RBP4.99□□□□□ -1.61
LRRC39-204ENST00000620882 CAPN6Q9Y6Q1 641 aa4.99□□□□□ -1.61
LRRC39-204ENST00000620882 TCRBV5S4A2TA0A5A2 114 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 E2F8A0AVK6 867 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 DVL2O14641 736 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 GNB5O14775 395 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 GSNP06396 782 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 SRFP11831 508 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 GRM3Q14832 879 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 DDB1Q16531 1140 aa4.98□□□□□ -1.61
LRRC39-204ENST00000620882 CWF19L1Q69YN2 538 aaKnown RBP4.98□□□□□ -1.61
LRRC39-204ENST00000620882 RSPO2Q6UXX9 243 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms