RNA–Protein interactions for RNA: ENST00000620535.4

NOP2-223, Transcript of NOP2 nucleolar protein, human

TSL 1 (best) BASIC

Gene NOP2, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOP2-223	ENST00000620535	CYLC1	P35663	651 aa	Predicted RBP	12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	SLC16A2	P36021	539 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	KRT83	P78385	493 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	TUBB2A	Q13885	445 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	CCDC96	Q2M329	555 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	CAGE1	Q8TC20	777 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	CDK5RAP3	Q96JB5	506 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	CCDC42	Q96M95	316 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	TUBB2B	Q9BVA1	445 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	KANSL2	Q9H9L4	492 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	SRCAP	Q6ZRS2	3230 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	POTEB2	H3BUK9	544 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	KRT86	O43790	486 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	IPO7	O95373	1038 aa	Known RBP	12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	AKR1B1	P15121	316 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	ECM1	Q16610	540 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	TTBK2	Q6IQ55	1244 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	MLXIP	Q9HAP2	919 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	TBC1D7	Q9P0N9	293 aa		12.85	□□□□□ -0.35
NOP2-223	ENST00000620535	TNNT3	P45378	269 aa	Predicted RBP	12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	GTF2I	P78347	998 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	C2orf54	Q08AI8	447 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	FKBP15	Q5T1M5	1219 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	CNNM4	Q6P4Q7	775 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	DPP8	Q6V1X1	898 aa	Predicted RBP	12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	MTMR9	Q96QG7	549 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	CUEDC2	Q9H467	287 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	SMARCAL1	Q9NZC9	954 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	ARHGAP20	Q9P2F6	1191 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	GGA1	Q9UJY5	639 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	CAPN6	Q9Y6Q1	641 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	CDK5RAP2	Q96SN8	1893 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	SSB	P05455	408 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	CXCR5	P32302	372 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	AMPD3	Q01432	767 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	CACNB1	Q02641	598 aa	Predicted RBP	12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	RAD51AP2	Q09MP3	1159 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	SNX29	Q8TEQ0	813 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	NOC3L	Q8WTT2	800 aa	Known RBP	12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	LARP4B	Q92615	738 aa	Known RBP	12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	LRRC4B	Q9NT99	713 aa		12.84	□□□□□ -0.35
NOP2-223	ENST00000620535	COL24A1	Q17RW2	1714 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	BTAF1	O14981	1849 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	MYBL2	P10244	700 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	MATR3	P43243	847 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	USP14	P54578	494 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	APBA1	Q02410	837 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	VWA3B	Q502W6	1294 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	CENPP	Q6IPU0	288 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	RRAGA	Q7L523	313 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	FAM114A1	Q8IWE2	563 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	RIN2	Q8WYP3	895 aa	Predicted RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	NUP58	Q9BVL2	599 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	TANGO6	Q9C0B7	1094 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	NDST4	Q9H3R1	872 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	EHD2	Q9NZN4	543 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	EIF3CL	B5ME19	914 aa	Known RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	PPP1R11	O60927	126 aa	Predicted RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	MOCS3	O95396	460 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	EIF4A3	P38919	411 aa	Known RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	ADCY7	P51828	1080 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	KIF5A	Q12840	1032 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	GPS2	Q13227	327 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	PAPD7	Q5XG87	772 aa	Known RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	DDX12P	Q92771	950 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	EIF3C	Q99613	913 aa	Known RBP	12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	MTMR4	Q9NYA4	1195 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	CALCOCO1	Q9P1Z2	691 aa		12.83	□□□□□ -0.36
NOP2-223	ENST00000620535	FAM193A	P78312	1265 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	EZH2	Q15910	746 aa	Known RBP	12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	KCTD1	Q719H9	257 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	TXLNB	Q8N3L3	684 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	SECISBP2L	Q93073	1101 aa	Known RBP	12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	ERGIC2	Q96RQ1	377 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	FGFBP2	Q9BYJ0	223 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	IFIH1	Q9BYX4	1025 aa	Known RBP	12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	DEF6	Q9H4E7	631 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	RIOX1	Q9H6W3	641 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	DDX4	Q9NQI0	724 aa	Known RBP	12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	DAGLA	Q9Y4D2	1042 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	LRRC53	A6NM62	1247 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	SCNN1D	P51172	638 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	SPA17	Q15506	151 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	VPS72	Q15906	364 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	TBC1D16	Q8TBP0	767 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	COG1	Q8WTW3	980 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	MAGEF1	Q9HAY2	307 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	NLRC4	Q9NPP4	1024 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	SIK3	Q9Y2K2	1263 aa		12.82	□□□□□ -0.36
NOP2-223	ENST00000620535	NPHP3-ACAD11	A0A0J9YXS1	232 aa		12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	MPHOSPH10	O00566	681 aa	Known RBP	12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	NCK2	O43639	380 aa		12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	MARCH6	O60337	910 aa		12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	IL1R1	P14778	569 aa		12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	DNA2	P51530	1060 aa		12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	ENOX2	Q16206	610 aa	Known RBP	12.81	□□□□□ -0.36
NOP2-223	ENST00000620535	ZSCAN26	Q16670	478 aa		12.81	□□□□□ -0.36

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