RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, human

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-223	ENST00000620507	MRPL44	Q9H9J2	332 aa	Known RBP	10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GOLGA6L10	A6NI86	522 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ZBTB5	O15062	677 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	RHOBTB3	O94955	611 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	MMP10	P09238	476 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	FCER1A	P12319	257 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	OAS2	P29728	719 aa	Known RBP	10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	SLC27A3	Q5K4L6	730 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PDXDC2P	Q6P474	469 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	UNC13D	Q70J99	1090 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	TRIM58	Q8NG06	486 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	DDX12P	Q92771	950 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	EPC1	Q9H2F5	836 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	NDST4	Q9H3R1	872 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CENPH	Q9H3R5	247 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	RIC8A	Q9NPQ8	531 aa		10.21	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GNA14	O95837	355 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	FGR	P09769	529 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PNMA6A	P0CW24	399 aa	Predicted RBP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CYP27A1	Q02318	531 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ORC2	Q13416	577 aa	Predicted RBP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	SFMBT2	Q5VUG0	894 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	NOX5	Q96PH1	765 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	MRFAP1	Q9Y605	127 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ITIH6	Q6UXX5	1313 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	FAM196B	A6NMK8	535 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L10	C9JJH3	530 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	TADA3	O75528	432 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GDF11	O95390	407 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PDHB	P11177	359 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	MCTP2	Q6DN12	878 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ADGRF4	Q8IZF3	695 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	DAGLB	Q8NCG7	672 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	NUCKS1	Q9H1E3	243 aa	Known RBP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ADAMTS7	Q9UKP4	1686 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CCDC151	A5D8V7	595 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PPIP5K2	O43314	1243 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	EPB41	P11171	864 aa	Known RBP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CRK	P46108	304 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CACNB1	Q02641	598 aa	Predicted RBP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	KLHL30	Q0D2K2	578 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	STK4	Q13043	487 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ADAM9	Q13443	819 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	HLTF	Q14527	1009 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CDKAL1	Q5VV42	579 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CCDC170	Q8IYT3	715 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	SPICE1	Q8N0Z3	855 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	RPGRIP1	Q96KN7	1286 aa		10.2	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PVALEF	A0A1B0GWK0	134 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507		A0A1W2PQC6	194 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L15	C9J2P7	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L13	C9JLJ4	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L11	C9JVI0	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L18	D6R9N7	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L22	D6RA61	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L17	D6RBQ6	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L19	D6RCP7	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L20	D6RJB6	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ATP8B1	O43520	1251 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GYS1	P13807	737 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	MAP3K9	P80192	1104 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CYP4A11	Q02928	519 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	LRRC63	Q05C16	580 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L24	Q0WX57	530 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PSMD2	Q13200	908 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	LONRF2	Q1L5Z9	754 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ANKRD40	Q6AI12	368 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP17L6P	Q6QN14	398 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	RASGRP2	Q7LDG7	609 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CHP1	Q99653	195 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	POLL	Q9UGP5	575 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	SUGT1	Q9Y2Z0	365 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	WNT7A	O00755	349 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CALU	O43852	315 aa	Predicted RBP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GCNT3	O95395	438 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	FOS	P01100	380 aa	Predicted RBP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	USP8	P40818	1118 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	DMTN	Q08495	405 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CDC37	Q16543	378 aa	Predicted RBP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	VWA3B	Q502W6	1294 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	SH3RF1	Q7Z6J0	888 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ANKRD13C	Q8N6S4	541 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	HPS3	Q969F9	1004 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	LSM14B	Q9BX40	385 aa	Known RBP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	KCND1	Q9NSA2	647 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	INTS13	Q9NVM9	706 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	STK24	Q9Y6E0	443 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	TUBGCP6	Q96RT7	1819 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	ERLIN2	O94905	339 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PABPC4	Q13310	644 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	GRIK5	Q16478	980 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	TTBK2	Q6IQ55	1244 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	PODN	Q7Z5L7	613 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	MASTL	Q96GX5	879 aa		10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	10.19	□□□□□ -0.78
RBFOX1-223	ENST00000620507	COL14A1	Q05707	1796 aa	Known RBP	10.18	□□□□□ -0.78
RBFOX1-223	ENST00000620507	CYTH3	O43739	400 aa		10.18	□□□□□ -0.78

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