RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 TRIM58Q8NG06 486 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 CHURC1Q8WUH1 139 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 IFIH1Q9BYX4 1025 aaKnown RBP11.01□□□□□ -0.65
CDH23-213ENST00000619887 FAM207AQ9NSI2 230 aaPredicted RBP11.01□□□□□ -0.65
CDH23-213ENST00000619887 PP2D1A8MPX8 630 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 CRKP46108 304 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 FKBP3Q00688 224 aaKnown RBP11.01□□□□□ -0.65
CDH23-213ENST00000619887 FBXO38Q6PIJ6 1188 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 TMEM179Q6ZVK1 233 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 L2HGDHQ9H9P8 463 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 PPIP5K2O43314 1243 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 GYS1P13807 737 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 AKR1B1P15121 316 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 PDIA5Q14554 519 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 USH1GQ495M9 461 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 RRAGAQ7L523 313 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 FAM163AQ96GL9 167 aaPredicted RBP11.01□□□□□ -0.65
CDH23-213ENST00000619887 CAPZA3Q96KX2 299 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 C7orf25Q9BPX7 421 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 TRIM9Q9C026 710 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 CALCOCO1Q9P1Z2 691 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 TSKSQ9UJT2 592 aa11.01□□□□□ -0.65
CDH23-213ENST00000619887 ITGB4P16144 1822 aa11□□□□□ -0.65
CDH23-213ENST00000619887 GOLGA6L10A6NI86 522 aa11□□□□□ -0.65
CDH23-213ENST00000619887 MMP10P09238 476 aa11□□□□□ -0.65
CDH23-213ENST00000619887 NOP2P46087 812 aaKnown RBP11□□□□□ -0.65
CDH23-213ENST00000619887 RAPGEF1Q13905 1077 aa11□□□□□ -0.65
CDH23-213ENST00000619887 EARS2Q5JPH6 523 aaKnown RBP11□□□□□ -0.65
CDH23-213ENST00000619887 SFMBT2Q5VUG0 894 aa11□□□□□ -0.65
CDH23-213ENST00000619887 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
CDH23-213ENST00000619887 HHIPL2Q6UWX4 724 aa11□□□□□ -0.65
CDH23-213ENST00000619887 LARGE2Q8N3Y3 721 aa11□□□□□ -0.65
CDH23-213ENST00000619887 ACRBPQ8NEB7 543 aa11□□□□□ -0.65
CDH23-213ENST00000619887 DRC1Q96MC2 740 aa11□□□□□ -0.65
CDH23-213ENST00000619887 NOX5Q96PH1 765 aa11□□□□□ -0.65
CDH23-213ENST00000619887 ZMYND15Q9H091 742 aa11□□□□□ -0.65
CDH23-213ENST00000619887 DBNDD1Q9H9R9 158 aa11□□□□□ -0.65
CDH23-213ENST00000619887 PDHBP11177 359 aa11□□□□□ -0.65
CDH23-213ENST00000619887 KRT13P13646 458 aa11□□□□□ -0.65
CDH23-213ENST00000619887 SLC16A2P36021 539 aa11□□□□□ -0.65
CDH23-213ENST00000619887 ZNF543Q08ER8 600 aa11□□□□□ -0.65
CDH23-213ENST00000619887 PRR16Q569H4 304 aa11□□□□□ -0.65
CDH23-213ENST00000619887 CDKAL1Q5VV42 579 aa11□□□□□ -0.65
CDH23-213ENST00000619887 RCSD1Q6JBY9 416 aa11□□□□□ -0.65
CDH23-213ENST00000619887 POTEDQ86YR6 584 aa11□□□□□ -0.65
CDH23-213ENST00000619887 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
CDH23-213ENST00000619887 TBC1D5Q92609 795 aa11□□□□□ -0.65
CDH23-213ENST00000619887 TMEM60Q9H2L4 133 aa11□□□□□ -0.65
CDH23-213ENST00000619887 RNF216Q9NWF9 866 aaPredicted RBP11□□□□□ -0.65
CDH23-213ENST00000619887 PKD2L1Q9P0L9 805 aa11□□□□□ -0.65
CDH23-213ENST00000619887 DDX41Q9UJV9 622 aaKnown RBP11□□□□□ -0.65
CDH23-213ENST00000619887 FAM205AQ6ZU69 1335 aa11□□□□□ -0.65
CDH23-213ENST00000619887 TRIM49BA6NDI0 452 aa11□□□□□ -0.65
CDH23-213ENST00000619887 DLGAP5Q15398 846 aa11□□□□□ -0.65
CDH23-213ENST00000619887 NELFCDQ8IXH7 590 aa11□□□□□ -0.65
CDH23-213ENST00000619887 PROM2Q8N271 834 aa11□□□□□ -0.65
CDH23-213ENST00000619887 GIMAP8Q8ND71 665 aaPredicted RBP11□□□□□ -0.65
CDH23-213ENST00000619887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11□□□□□ -0.65
CDH23-213ENST00000619887 IL17RBQ9NRM6 502 aa11□□□□□ -0.65
CDH23-213ENST00000619887 KIAA1024Q9UPX6 916 aa11□□□□□ -0.65
CDH23-213ENST00000619887 ERICH4A6NGS2 130 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 WTIPA6NIX2 430 aaPredicted RBP10.99□□□□□ -0.65
CDH23-213ENST00000619887 SLC26A4O43511 780 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 ASIC2Q16515 512 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 UBE2SQ16763 222 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 TYW1BQ6NUM6 668 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 GUF1Q8N442 669 aaKnown RBP10.99□□□□□ -0.65
CDH23-213ENST00000619887 RAD54LQ92698 747 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 ANO3Q9BYT9 981 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 FAM184BQ9ULE4 1060 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 ZBTB21Q9ULJ3 1066 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 PRKG1Q13976 671 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 CDC37Q16543 378 aaPredicted RBP10.99□□□□□ -0.65
CDH23-213ENST00000619887 CERKQ8TCT0 537 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 SELENOOQ9BVL4 669 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 MYO3BQ8WXR4 1341 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 CCDC151A5D8V7 595 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 BMP3P12645 472 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 TMEM260Q9NX78 707 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 TBC1D7Q9P0N9 293 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 SLIT2O94813 1529 aa10.99□□□□□ -0.65
CDH23-213ENST00000619887 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 CLCN6P51797 869 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 PPP4R3AQ6IN85 833 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 RASGRP2Q7LDG7 609 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 REXO1L1PQ8IX06 675 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 ZNF710Q8N1W2 664 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 NDST4Q9H3R1 872 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 MRPL11Q9Y3B7 192 aaKnown RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 COL4A3BPQ9Y5P4 624 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 ARID5AQ03989 594 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 TBX2Q13207 712 aaPredicted RBP10.98□□□□□ -0.65
CDH23-213ENST00000619887 SYDE2Q5VT97 1194 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 PPP4R3CPQ6ZMV5 832 aa10.98□□□□□ -0.65
CDH23-213ENST00000619887 METTL14Q9HCE5 456 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms