RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ENAHQ8N8S7 591 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-221ENST00000619555 RGS22Q8NE09 1264 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 DNERQ8NFT8 737 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 VWCEQ96DN2 955 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 SCLYQ96I15 445 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 ZSCAN10Q96SZ4 725 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-221ENST00000619555 MTG1Q9BT17 334 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-221ENST00000619555 DSCC1Q9BVC3 393 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 IL25Q9H293 177 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 VAT1LQ9HCJ6 419 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 SCN10AQ9Y5Y9 1956 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 CHD9Q3L8U1 2897 aa13.06□□□□□ -0.32
TARDBP-221ENST00000619555 MYH6P13533 1939 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 HIP1O00291 1037 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 ARIH2O95376 493 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 TXNP10599 105 aaKnown RBP13.05□□□□□ -0.32
TARDBP-221ENST00000619555 PPP2R5BQ15173 497 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 IMMTQ16891 758 aaKnown RBP13.05□□□□□ -0.32
TARDBP-221ENST00000619555 NBPF20Q3BBV1 942 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 USP38Q8NB14 1042 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-221ENST00000619555 SCFD2Q8WU76 684 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 TAAR1Q96RJ0 339 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 MPHOSPH6Q99547 160 aaKnown RBP13.05□□□□□ -0.32
TARDBP-221ENST00000619555 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-221ENST00000619555 COL20A1Q9P218 1284 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 BAZ2BQ9UIF8 2168 aaKnown RBP13.05□□□□□ -0.32
TARDBP-221ENST00000619555 TNKSO95271 1327 aa13.05□□□□□ -0.32
TARDBP-221ENST00000619555 GBF1Q92538 1859 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 A6NJR5 290 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
TARDBP-221ENST00000619555 NEFLP07196 543 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 NT5C2P49902 561 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 BRDTQ58F21 947 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-221ENST00000619555 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
TARDBP-221ENST00000619555 KRT23Q9C075 422 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 NKX2-4Q9H2Z4 354 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 PRDM12Q9H4Q4 367 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 JMJD4Q9H9V9 463 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 CTNNA3Q9UI47 895 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 MSRAQ9UJ68 235 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
TARDBP-221ENST00000619555 SCN5AQ14524 2016 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 NCOR1O75376 2440 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 ABCB11O95342 1321 aa13.04□□□□□ -0.32
TARDBP-221ENST00000619555 SPTBN5Q9NRC6 3674 aaKnown RBP13.04□□□□□ -0.32
TARDBP-221ENST00000619555 TET1Q8NFU7 2136 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 B4DLN1 442 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 PARP1P09874 1014 aaKnown RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 RABGGTBP53611 331 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 TTLL4Q14679 1199 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 RAB30Q15771 203 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 ASPRV1Q53RT3 343 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 CCDC62Q6P9F0 684 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 SEPT14Q6ZU15 432 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 FBXO11Q86XK2 927 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
TARDBP-221ENST00000619555 MTIF3Q9H2K0 278 aaKnown RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 TRIP12Q14669 1992 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-221ENST00000619555 ZBBXA8MT70 800 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 KPNA6O60684 536 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 MYOGP15173 224 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 CHMP4BP1P59074 171 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 ADGRE1Q14246 886 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 LY6KQ17RY6 165 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 DEFB128Q7Z7B8 93 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 NSUN6Q8TEA1 469 aaKnown RBP13.02□□□□□ -0.33
TARDBP-221ENST00000619555 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 PPM1EQ8WY54 764 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 RMDN3Q96TC7 470 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 UBAC1Q9BSL1 405 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 PRDM6Q9NQX0 595 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.33
TARDBP-221ENST00000619555 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 RAD50Q92878 1312 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 CHD7Q9P2D1 2997 aa13.02□□□□□ -0.33
TARDBP-221ENST00000619555 EIF2AK2P19525 551 aaKnown RBP13.01□□□□□ -0.33
TARDBP-221ENST00000619555 ARHGAP1Q07960 439 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 SEC23AQ15436 765 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 IFIT1BQ5T764 474 aaKnown RBP13.01□□□□□ -0.33
TARDBP-221ENST00000619555 TTC22Q5TAA0 569 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 NFRKBQ6P4R8 1299 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 CHST3Q7LGC8 479 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-221ENST00000619555 CNNM2Q9H8M5 875 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 KIAA1217Q5T5P2 1943 aa13.01□□□□□ -0.33
TARDBP-221ENST00000619555 MYH7BA7E2Y1 1941 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 OPLAHO14841 1288 aa13□□□□□ -0.33
TARDBP-221ENST00000619555 PPP1R11O60927 126 aaPredicted RBP13□□□□□ -0.33
TARDBP-221ENST00000619555 CFBP00751 764 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms