RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 GDAQ9Y2T3 454 aa21.4■■□□□ 1.02
PSPC1-206ENST00000619300 PIK3CDO00329 1044 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 PRCPP42785 496 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 PAK1Q13153 545 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 TBC1D10BQ4KMP7 808 aaPredicted RBP21.39■■□□□ 1.02
PSPC1-206ENST00000619300 CDKAL1Q5VV42 579 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 KIFC2Q96AC6 838 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 CDK5RAP3Q96JB5 506 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 RANBP17Q9H2T7 1088 aaKnown RBP21.39■■□□□ 1.02
PSPC1-206ENST00000619300 FEM1BQ9UK73 627 aa21.39■■□□□ 1.02
PSPC1-206ENST00000619300 TAL1P17542 331 aaPredicted RBP21.39■■□□□ 1.01
PSPC1-206ENST00000619300 CCZ1BP86790 482 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 CCZ1P86791 482 aaPredicted RBP21.39■■□□□ 1.01
PSPC1-206ENST00000619300 ARMCX5Q6P1M9 558 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 SV2BQ7L1I2 683 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 NLGN2Q8NFZ4 835 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 SNX29Q8TEQ0 813 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 NELFBQ8WX92 580 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 KCNMB3Q9NPA1 279 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 BLOC1S4Q9NUP1 217 aa21.39■■□□□ 1.01
PSPC1-206ENST00000619300 SREBF1P36956 1147 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 TPD52L1Q16890 204 aaPredicted RBP21.38■■□□□ 1.01
PSPC1-206ENST00000619300 CCDC84Q86UT8 332 aaPredicted RBP21.38■■□□□ 1.01
PSPC1-206ENST00000619300 ADSSL1Q8N142 457 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 GIMAP8Q8ND71 665 aaPredicted RBP21.38■■□□□ 1.01
PSPC1-206ENST00000619300 CCDC47Q96A33 483 aaKnown RBP21.38■■□□□ 1.01
PSPC1-206ENST00000619300 NUDT12Q9BQG2 462 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 HACL1Q9UJ83 578 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 SFPQP23246 707 aaKnown RBP eCLIP21.38■■□□□ 1.011e-7■□□□□ 8.6
PSPC1-206ENST00000619300 NR1I3Q14994 352 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 GJA10Q969M2 543 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 ZNF341Q9BYN7 854 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 DEFB129Q9H1M3 183 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 GINM1Q9NU53 330 aa21.38■■□□□ 1.01
PSPC1-206ENST00000619300 ASTN2O75129 1339 aaPredicted RBP21.38■■□□□ 1.01
PSPC1-206ENST00000619300 MYH7BA7E2Y1 1941 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 HOXA13P31271 388 aaPredicted RBP21.37■■□□□ 1.01
PSPC1-206ENST00000619300 KIF4BQ2VIQ3 1234 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 Q4G0T1 1027 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 TMEM119Q4V9L6 283 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 DNTTIP2Q5QJE6 756 aaKnown RBP21.37■■□□□ 1.01
PSPC1-206ENST00000619300 CCDC174Q6PII3 467 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 SLFN12Q8IYM2 578 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 GTPBP4Q9BZE4 634 aaKnown RBP21.37■■□□□ 1.01
PSPC1-206ENST00000619300 MAPK8IP1Q9UQF2 711 aa21.37■■□□□ 1.01
PSPC1-206ENST00000619300 A0A1B0GTH6 734 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 CTNND1O60716 968 aaKnown RBP21.36■■□□□ 1.01
PSPC1-206ENST00000619300 ASIC1P78348 528 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 APTXQ7Z2E3 356 aaKnown RBP21.36■■□□□ 1.01
PSPC1-206ENST00000619300 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
PSPC1-206ENST00000619300 CTAGE1Q96RT6 745 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 FEZ1Q99689 392 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 COBLO75128 1261 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 CIITAP33076 1130 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 STIM1Q13586 685 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 RAD54LQ92698 747 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 UPF1Q92900 1129 aaKnown RBP eCLIP21.36■■□□□ 1.01
PSPC1-206ENST00000619300 EXOC1Q9NV70 894 aa21.36■■□□□ 1.01
PSPC1-206ENST00000619300 ZNF541Q9H0D2 1346 aa21.35■■□□□ 1.01
PSPC1-206ENST00000619300 TBX3O15119 743 aa21.35■■□□□ 1.01
PSPC1-206ENST00000619300 MCM6Q14566 821 aa21.35■■□□□ 1.01
PSPC1-206ENST00000619300 PRR16Q569H4 304 aa21.35■■□□□ 1.01
PSPC1-206ENST00000619300 FBXO28Q9NVF7 368 aa21.35■■□□□ 1.01
PSPC1-206ENST00000619300 MRPL11Q9Y3B7 192 aaKnown RBP21.35■■□□□ 1.01
PSPC1-206ENST00000619300 CYP3A4P08684 503 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 PDE4DQ08499 809 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 HYIQ5T013 277 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 ETNPPLQ8TBG4 499 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 LRRC27Q9C0I9 530 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 MYMKA6NI61 221 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 H7C1D1 291 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 SLC26A4O43511 780 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 ECM1Q16610 540 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 SPECC1LQ69YQ0 1117 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 LPAR1Q92633 364 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 LENG9Q96B70 501 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 KIAA1683Q9H0B3 1180 aa21.34■■□□□ 1.01
PSPC1-206ENST00000619300 ADD3Q9UEY8 706 aaKnown RBP21.34■■□□□ 1.01
PSPC1-206ENST00000619300 R3HCC1Q9Y3T6 440 aaKnown RBP21.34■■□□□ 1.01
PSPC1-206ENST00000619300 LRRC10BA6NIK2 292 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 FAM86B1E9PN63 330 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 GCOM1H8Y6P7 765 aaPredicted RBP21.33■■□□□ 1.01
PSPC1-206ENST00000619300 PSMA7O14818 248 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 CFBP00751 764 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 FAM86B2P0C5J1 330 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 POLR2MP0CAP2 368 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 INPP5BP32019 993 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 CCT6AP40227 531 aaKnown RBP21.33■■□□□ 1.01
PSPC1-206ENST00000619300 TBX2Q13207 712 aaPredicted RBP21.33■■□□□ 1.01
PSPC1-206ENST00000619300 PTPN21Q16825 1174 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 NBPF12Q5TAG4 269 aaPredicted RBP21.33■■□□□ 1.01
PSPC1-206ENST00000619300 FCHSD1Q86WN1 690 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 TBC1D5Q92609 795 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 DHTKD1Q96HY7 919 aaPredicted RBP21.33■■□□□ 1.01
PSPC1-206ENST00000619300 UIMC1Q96RL1 719 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 NT5C3AQ9H0P0 336 aa21.33■■□□□ 1.01
PSPC1-206ENST00000619300 KDM3AQ9Y4C1 1321 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 PVALEFA0A1B0GWK0 134 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 NRDCO43847 1150 aa21.33■■□□□ 1
PSPC1-206ENST00000619300 SPAG1Q07617 926 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms