RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 NMRK2Q9NPI5 230 aa9.55□□□□□ -0.88
CBWD1-228ENST00000619157 SH3TC1Q8TE82 1336 aa9.55□□□□□ -0.88
CBWD1-228ENST00000619157 NEFLP07196 543 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 ZNF865P0CJ78 1059 aaPredicted RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 ALDH1B1P30837 517 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 SLFN5Q08AF3 891 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 IKZF1Q13422 519 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 CWF19L2Q2TBE0 894 aaKnown RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 CCDC93Q567U6 631 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 RPS26P11Q5JNZ5 115 aaPredicted RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 TRMT2AQ8IZ69 625 aaKnown RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 CCDC74AQ96AQ1 378 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 HEXIM2Q96MH2 286 aaKnown RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 KRTAP4-11Q9BYQ6 195 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 TAOK3Q9H2K8 898 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 GPN3Q9UHW5 284 aaPredicted RBP9.54□□□□□ -0.88
CBWD1-228ENST00000619157 DUOX1Q9NRD9 1551 aa9.54□□□□□ -0.88
CBWD1-228ENST00000619157 TAF1P21675 1872 aa9.53□□□□□ -0.88
CBWD1-228ENST00000619157 ICMTO60725 284 aa9.53□□□□□ -0.88
CBWD1-228ENST00000619157 CILP2Q8IUL8 1156 aa9.53□□□□□ -0.88
CBWD1-228ENST00000619157 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.53□□□□□ -0.88
CBWD1-228ENST00000619157 CCDC191Q8NCU4 936 aa9.53□□□□□ -0.88
CBWD1-228ENST00000619157 RPGRQ92834 1020 aaKnown RBP9.53□□□□□ -0.88
CBWD1-228ENST00000619157 CELF1Q92879 486 aaKnown RBP9.53□□□□□ -0.88
CBWD1-228ENST00000619157 ZNF277Q9NRM2 450 aaPredicted RBP9.53□□□□□ -0.88
CBWD1-228ENST00000619157 KRT82Q9NSB4 513 aa9.53□□□□□ -0.88
CBWD1-228ENST00000619157 CCDC88AQ3V6T2 1871 aa9.53□□□□□ -0.88
CBWD1-228ENST00000619157 LRRC37AA6NMS7 1700 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 F6X3S4 739 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 IRS4O14654 1257 aaPredicted RBP9.52□□□□□ -0.89
CBWD1-228ENST00000619157 PCCAP05165 728 aaPredicted RBP9.52□□□□□ -0.89
CBWD1-228ENST00000619157 CASP7P55210 303 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 C1QTNF8P60827 252 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 ZP2Q05996 745 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 GRM2Q14416 872 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.89
CBWD1-228ENST00000619157 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
CBWD1-228ENST00000619157 RBM17Q96I25 401 aaKnown RBP9.52□□□□□ -0.89
CBWD1-228ENST00000619157 STK31Q9BXU1 1019 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 TNKS2Q9H2K2 1166 aa9.52□□□□□ -0.89
CBWD1-228ENST00000619157 DICER1Q9UPY3 1922 aaKnown RBP9.51□□□□□ -0.89
CBWD1-228ENST00000619157 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.51□□□□□ -0.89
CBWD1-228ENST00000619157 E9PSI1 815 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 DDX58O95786 925 aaKnown RBP9.51□□□□□ -0.89
CBWD1-228ENST00000619157 RAP1GAPP47736 663 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 SERPINB4P48594 390 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 GRAPQ13588 217 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 SOGA3Q5TF21 947 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 PDZD3Q86UT5 571 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 GRAPLQ8TC17 118 aaPredicted RBP9.51□□□□□ -0.89
CBWD1-228ENST00000619157 STK35Q8TDR2 534 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 PSMD1Q99460 953 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 CWC25Q9NXE8 425 aaPredicted RBP9.51□□□□□ -0.89
CBWD1-228ENST00000619157 ATP6V0A2Q9Y487 856 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 ZNF541Q9H0D2 1346 aa9.51□□□□□ -0.89
CBWD1-228ENST00000619157 GLTPD2A6NH11 291 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 EIF1AYO14602 144 aaKnown RBP9.5□□□□□ -0.89
CBWD1-228ENST00000619157 NDUFB5O43674 189 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 CFPP27918 469 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 ECM1Q16610 540 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 BEND3Q5T5X7 828 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 FYB2Q5VWT5 728 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 RTKN2Q8IZC4 609 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 EPS8L3Q8TE67 593 aaKnown RBP9.5□□□□□ -0.89
CBWD1-228ENST00000619157 DNAAF4Q8WXU2 420 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 LTBP1Q14766 1721 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 CDHR2Q9BYE9 1310 aa9.5□□□□□ -0.89
CBWD1-228ENST00000619157 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 DDNO94850 711 aaPredicted RBP9.49□□□□□ -0.89
CBWD1-228ENST00000619157 IARSP41252 1262 aaKnown RBP9.49□□□□□ -0.89
CBWD1-228ENST00000619157 FCGRTP55899 365 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 GCKRQ14397 625 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 DTHD1Q6ZMT9 781 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 DDX46Q7L014 1031 aaKnown RBP9.49□□□□□ -0.89
CBWD1-228ENST00000619157 SP8Q8IXZ3 490 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 CCDC82Q8N4S0 544 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 SSH1Q8WYL5 1049 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 FAM129BQ96TA1 746 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 RTFDC1Q9BY42 306 aaPredicted RBP9.49□□□□□ -0.89
CBWD1-228ENST00000619157 CHMP4AQ9BY43 222 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 CTNND2Q9UQB3 1225 aa9.49□□□□□ -0.89
CBWD1-228ENST00000619157 WTIPA6NIX2 430 aaPredicted RBP9.48□□□□□ -0.89
CBWD1-228ENST00000619157 FZD9O00144 591 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 GPR182O15218 404 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 PDE8AO60658 829 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 BBOX1O75936 387 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 ARHGAP4P98171 946 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 HNRNPUQ00839 825 aaKnown RBP eCLIP9.48□□□□□ -0.89
CBWD1-228ENST00000619157 UBE3BQ7Z3V4 1068 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 SPACA3Q8IXA5 215 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 LINS1Q8NG48 757 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 ASB11Q8WXH4 323 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 TOX2Q96NM4 488 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 BCL2L13Q9BXK5 485 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 FAM53CQ9NYF3 392 aa9.48□□□□□ -0.89
CBWD1-228ENST00000619157 EGFL7Q9UHF1 273 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms