RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 LRRC41Q15345 812 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 CCDC62Q6P9F0 684 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 ZNF713Q8N859 430 aaPredicted RBP9.54□□□□□ -0.88
NEK3-209ENST00000618856 NSUN6Q8TEA1 469 aaKnown RBP9.54□□□□□ -0.88
NEK3-209ENST00000618856 RMDN3Q96TC7 470 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 TSEN34Q9BSV6 310 aaKnown RBP9.54□□□□□ -0.88
NEK3-209ENST00000618856 UPF3BQ9BZI7 483 aaKnown RBP9.54□□□□□ -0.88
NEK3-209ENST00000618856 XPNPEP3Q9NQH7 507 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 PXMP2Q9NR77 195 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 PDGFCQ9NRA1 345 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 ALPK3Q96L96 1907 aa9.54□□□□□ -0.88
NEK3-209ENST00000618856 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 GOLGA8AA7E2F4 631 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 GOLGA8BA8MQT2 603 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 GCOM1H8Y6P7 765 aaPredicted RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 PRPF3O43395 683 aaKnown RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 EIF3JO75822 258 aaKnown RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 RGS20O76081 388 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 CFBP00751 764 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 POLR2MP0CAP2 368 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 IFNAR1P17181 557 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 ADCYAP1R1P41586 468 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 METAP2P50579 478 aaKnown RBP eCLIP9.53□□□□□ -0.88
NEK3-209ENST00000618856 TNFAIP2Q03169 654 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 PKN1Q16512 942 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 DUSP28Q4G0W2 176 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 TMEM63BQ5T3F8 832 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 ANO1Q5XXA6 986 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 TYW1BQ6NUM6 668 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 FBXO16Q8IX29 292 aaPredicted RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 MPHOSPH6Q99547 160 aaKnown RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 KIF2CQ99661 725 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 PDCD2LQ9BRP1 358 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 HTATIP2Q9BUP3 242 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 PDRG1Q9NUG6 133 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 BARHL2Q9NY43 387 aa9.53□□□□□ -0.88
NEK3-209ENST00000618856 SEC63Q9UGP8 760 aaKnown RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 ZHX1Q9UKY1 873 aaPredicted RBP9.53□□□□□ -0.88
NEK3-209ENST00000618856 MYADML2A6NDP7 307 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 MOXD2PA6NHM9 499 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 B4DLN1 442 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 STXBP3O00186 592 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 PGK1P00558 417 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 NR3C2P08235 984 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 HOXA13P31271 388 aaPredicted RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 RBM25P49756 843 aaKnown RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 CLK2P49760 499 aaKnown RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 MRPL12P52815 198 aaKnown RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 PDE4DQ08499 809 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 PGM5Q15124 567 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 PFKFB3Q16875 520 aaPredicted RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 GJC2Q5T442 439 aaPredicted RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 WWC2Q6AWC2 1192 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 RNF180Q86T96 592 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
NEK3-209ENST00000618856 RNF26Q9BY78 433 aaPredicted RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
NEK3-209ENST00000618856 hCG_1642624A0A1W2PR95 340 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 A6NJR5 290 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 NKRFO15226 690 aaKnown RBP eCLIP9.51□□□□□ -0.89
NEK3-209ENST00000618856 PFKFB2O60825 505 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 STAM2O75886 525 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 ARIH2O95376 493 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 ACLYP53396 1101 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 IRX5P78411 483 aaPredicted RBP9.51□□□□□ -0.89
NEK3-209ENST00000618856 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
NEK3-209ENST00000618856 FGD1P98174 961 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 STXBP2Q15833 593 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 LRRC26Q2I0M4 334 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
NEK3-209ENST00000618856 ARHGEF16Q5VV41 709 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 XRRA1Q6P2D8 792 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 USP17L6PQ6QN14 398 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 EEPD1Q7L9B9 569 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 IL31RAQ8NI17 732 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 SCFD2Q8WU76 684 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 PIBF1Q8WXW3 757 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 EMID1Q96A84 441 aaPredicted RBP9.51□□□□□ -0.89
NEK3-209ENST00000618856 WDR11Q9BZH6 1224 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 PSTPIP2Q9H939 334 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 RIC8AQ9NPQ8 531 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 TPCN1Q9ULQ1 816 aa9.51□□□□□ -0.89
NEK3-209ENST00000618856 KIAA1217Q5T5P2 1943 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 KBTBD13C9JR72 458 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 TGFB3P10600 412 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 SCG2P13521 617 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
NEK3-209ENST00000618856 PTGS1P23219 599 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 ICAM3P32942 547 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 CDK7P50613 346 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 AK2P54819 239 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 ANKRD1Q15327 319 aa9.5□□□□□ -0.89
NEK3-209ENST00000618856 KCNA10Q16322 511 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms