RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 IKBKEQ14164 716 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 PTGISQ16647 500 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 SLFNL1Q499Z3 407 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 EP400NLQ6ZTU2 488 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 NEDD1Q8NHV4 660 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 STRBPQ96SI9 672 aaKnown RBP9.26□□□□□ -0.93
CBWD1-227ENST00000618361 MPHOSPH6Q99547 160 aaKnown RBP9.26□□□□□ -0.93
CBWD1-227ENST00000618361 PUS7LQ9H0K6 701 aaKnown RBP9.26□□□□□ -0.93
CBWD1-227ENST00000618361 MTUS1Q9ULD2 1270 aa9.26□□□□□ -0.93
CBWD1-227ENST00000618361 MYH8P13535 1937 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 GSG1L2A8MUP6 293 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 GFRA3O60609 400 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 ICAM1P05362 532 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 SLC1A4P43007 532 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 HTRA4P83105 476 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-227ENST00000618361 PPP2R5BQ15173 497 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 MUM1L1Q5H9M0 696 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 RCSD1Q6JBY9 416 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 SUGP1Q8IWZ8 645 aaKnown RBP9.25□□□□□ -0.93
CBWD1-227ENST00000618361 BANK1Q8NDB2 785 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-227ENST00000618361 SCFD2Q8WU76 684 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 BOLA2Q9H3K6 86 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 PNMA2Q9UL42 364 aa9.25□□□□□ -0.93
CBWD1-227ENST00000618361 DDX49Q9Y6V7 483 aaKnown RBP9.25□□□□□ -0.93
CBWD1-227ENST00000618361 COL4A4P53420 1690 aaPredicted RBP9.25□□□□□ -0.93
CBWD1-227ENST00000618361 MINDY4BA8MYZ0 360 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 H3BNC9 293 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 H3BQ06 376 aaPredicted RBP9.24□□□□□ -0.93
CBWD1-227ENST00000618361 NBNO60934 754 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 RAB11FIP3O75154 756 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 TSPY3P0CV98 308 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 TSPY8P0CW00 308 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 CKBP12277 381 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 GNAT2P19087 354 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 EDNRBP24530 442 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 IRS1P35568 1242 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 IKQ13123 557 aaPredicted RBP9.24□□□□□ -0.93
CBWD1-227ENST00000618361 NSMFQ6X4W1 530 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 TMCO2Q7Z6W1 182 aaPredicted RBP9.24□□□□□ -0.93
CBWD1-227ENST00000618361 ITPRIPQ8IWB1 547 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 FTSJ3Q8IY81 847 aaKnown RBP9.24□□□□□ -0.93
CBWD1-227ENST00000618361 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 DNERQ8NFT8 737 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 EDAQ92838 391 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 PHOX2BQ99453 314 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 NSUN3Q9H649 340 aaKnown RBP9.24□□□□□ -0.93
CBWD1-227ENST00000618361 CCPG1Q9ULG6 757 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 MCM3APO60318 1980 aa9.24□□□□□ -0.93
CBWD1-227ENST00000618361 TANC1Q9C0D5 1861 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 SCN10AQ9Y5Y9 1956 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 B4DLN1 442 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 AMHP03971 560 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 MRPL12P52815 198 aaKnown RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 PDE4BQ07343 736 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 PTK7Q13308 1070 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 MKRN4PQ13434 485 aaPredicted RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 BAATQ14032 418 aaPredicted RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 SMAD2Q15796 467 aaKnown RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 EPC2Q52LR7 807 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 GDF6Q6KF10 455 aaPredicted RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 ERMP1Q7Z2K6 904 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 DHX38Q92620 1227 aaKnown RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 PURBQ96QR8 312 aaKnown RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 C17orf80Q9BSJ5 609 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 MAF1Q9H063 256 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 RANBP17Q9H2T7 1088 aaKnown RBP9.23□□□□□ -0.93
CBWD1-227ENST00000618361 GTF2IRD1Q9UHL9 959 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 CACNA1AO00555 2505 aa9.23□□□□□ -0.93
CBWD1-227ENST00000618361 SCN5AQ14524 2016 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 LGR5O75473 907 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 CHGBP05060 677 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 SLC3A2P08195 630 aaKnown RBP9.22□□□□□ -0.93
CBWD1-227ENST00000618361 TXNP10599 105 aaKnown RBP9.22□□□□□ -0.93
CBWD1-227ENST00000618361 CASTP20810 708 aaKnown RBP9.22□□□□□ -0.93
CBWD1-227ENST00000618361 MCCP23508 829 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 PDE4DQ08499 809 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 GPM6BQ13491 265 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 TCEAL5Q5H9L2 206 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 TRAF7Q6Q0C0 670 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 BTNL9Q6UXG8 535 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 RNF135Q8IUD6 432 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 STK11IPQ8N1F8 1099 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 APPBP2Q92624 585 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 ATOH1Q92858 354 aaPredicted RBP9.22□□□□□ -0.93
CBWD1-227ENST00000618361 KATNAL1Q9BW62 490 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 LMAN2LQ9H0V9 348 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 MUTYHQ9UIF7 546 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 ISY1Q9ULR0 285 aaKnown RBP9.22□□□□□ -0.93
CBWD1-227ENST00000618361 BAZ2AQ9UIF9 1905 aaKnown RBP9.22□□□□□ -0.93
CBWD1-227ENST00000618361 EMSYQ7Z589 1322 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 WDFY4Q6ZS81 3184 aa9.22□□□□□ -0.93
CBWD1-227ENST00000618361 COL4A6Q14031 1691 aa9.21□□□□□ -0.93
CBWD1-227ENST00000618361 PATL2C9JE40 543 aaKnown RBP9.21□□□□□ -0.94
CBWD1-227ENST00000618361 NFIBO00712 420 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms