RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 RAVER2Q9HCJ3 691 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 RNF146Q9NTX7 359 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ZKSCAN5Q9Y2L8 839 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 SPOPO43791 374 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 PPM1FP49593 454 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 SNAP25P60880 206 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 HDLBPQ00341 1268 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 TMTC1Q8IUR5 882 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 RNF34Q969K3 372 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 RBSNQ9H1K0 784 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 PXDNQ92626 1479 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 TMEM191BP0C7N4 346 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 HOXD10P28358 340 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF75DP51815 510 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 TUBB4BP68371 445 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 KLHL30Q0D2K2 578 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF569Q5MCW4 686 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 SFMBT2Q5VUG0 894 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 NSUN6Q8TEA1 469 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 TSNARE1Q96NA8 513 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 RMDN3Q96TC7 470 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 SLC39A2Q9NP94 309 aa10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 CGNQ9P2M7 1197 aaKnown RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
CLTCL1-208ENST00000615606 KCNJ18B7U540 433 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PLSCR1O15162 318 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 CALRP27797 417 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 KCNJ12Q14500 433 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 CDC42EP5Q6NZY7 148 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 LINC00301Q8NCQ3 95 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PRIMPOLQ96LW4 560 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 TRERF1Q96PN7 1200 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PCDHA6Q9UN73 950 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PCDHA8Q9Y5H6 950 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 LARGE1O95461 756 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 JAK3P52333 1124 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 TOB2Q14106 344 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PNMA8AQ86V59 439 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 RCOR1Q9UKL0 485 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 ZNF609O15014 1411 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 MAP2P11137 1827 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 HNRNPDLO14979 420 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 NMT2O60551 498 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 MMP14P50281 582 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 ADAM9Q13443 819 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 POMGNT1Q8WZA1 660 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 RPS6KC1Q96S38 1066 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 INCENPQ9NQS7 918 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 C1orf112Q9NSG2 853 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 COL3A1P02461 1466 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PPP2R3AQ06190 1150 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 PKP1Q13835 747 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 ANGEL2Q5VTE6 544 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 GBP6Q6ZN66 633 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 NAP1L3Q99457 506 aaPredicted RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 ACAD9Q9H845 621 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 MYOZ2Q9NPC6 264 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 KMT5AQ9NQR1 393 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 GGA3Q9NZ52 723 aa10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 SRPRBQ9Y5M8 271 aaKnown RBP10.41□□□□□ -0.74
CLTCL1-208ENST00000615606 C19orf81C9J6K1 198 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 TSGA10IPQ3SY00 556 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 SGMS1Q86VZ5 419 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 ACCSQ96QU6 501 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 INO80B-WBP1J3KQ70 363 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 SLFN14P0C7P3 912 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 ERCC3P19447 782 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 DCUN1D2Q6PH85 259 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 IPO4Q8TEX9 1081 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 LPAR1Q92633 364 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 LSM14BQ9BX40 385 aaKnown RBP10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 INO80BQ9C086 356 aaPredicted RBP10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 TMEM63CQ9P1W3 806 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 ANKFY1Q9P2R3 1169 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 PRKAG2Q9UGJ0 569 aa10.4□□□□□ -0.74
CLTCL1-208ENST00000615606 SRGNP10124 158 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 RESTQ13127 1097 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 ORC2Q13416 577 aaPredicted RBP10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 ARHGAP44Q17R89 818 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 SPATA1Q5VX52 437 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC155Q8N6L0 562 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 FAM167AQ96KS9 214 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 AIFM3Q96NN9 605 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC77Q9BR77 488 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 NACA2Q9H009 215 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 BCCIPQ9P287 314 aaKnown RBP eCLIP10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 SSX2IPQ9Y2D8 614 aa10.4□□□□□ -0.75
CLTCL1-208ENST00000615606 GOLGA6L7A0A1B0GV03 622 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 ERICH4A6NGS2 130 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 STAT1P42224 750 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 TNNC1P63316 161 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 MAATS1Q7Z4T9 603 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC51Q96ER9 411 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 CCDC97Q96F63 343 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 TMEM206Q9H813 350 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 TBC1D22BQ9NU19 505 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 AGTPBP1Q9UPW5 1226 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 STAT3P40763 770 aa10.39□□□□□ -0.75
CLTCL1-208ENST00000615606 MAGEA1P43355 309 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms