RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 EIF3CQ99613 913 aaKnown RBP12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 DHX36Q9H2U1 1008 aaKnown RBP12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MYO1AQ9UBC5 1043 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SAMM50Q9Y512 469 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KIF5CO60282 957 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PRCPP42785 496 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NAPAP54920 295 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 AMPD3Q01432 767 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SEPT2Q15019 361 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 INF2Q27J81 1249 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TMTC1Q8IUR5 882 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GPR161Q8N6U8 529 aaKnown RBP12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KIFC2Q96AC6 838 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MBOAT7Q96N66 472 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SAP30BPQ9UHR5 308 aaKnown RBP12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 STX8Q9UNK0 236 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 JAG2Q9Y219 1238 aa12.12□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 H0YHG0 523 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SRGAP2O75044 1071 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SHMT1P34896 483 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 COPB1P53618 953 aaKnown RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 APOBEC3HQ6NTF7 200 aaKnown RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MOXD1Q6UVY6 613 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 RETREG2Q8NC44 543 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CAGE1Q8TC20 777 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 LRRC27Q9C0I9 530 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ATRNL1Q5VV63 1379 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 UBA7P41226 1012 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 VSNL1P62760 191 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TTI2Q6NXR4 508 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ANKRD20A12PQ8NF67 263 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MMTAG2Q9BU76 263 aaKnown RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SERPINB13Q9UIV8 391 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CTNND2Q9UQB3 1225 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ATF5Q9Y2D1 282 aaPredicted RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CYP3A7-CYP3A51PA0A087WV96 503 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GYPCP04921 128 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CYP3A7P24462 503 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 EHHADHQ08426 723 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 RBL2Q08999 1139 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SOGA3Q5TF21 947 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SLC35F6Q8N357 371 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GOLGA5Q8TBA6 731 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 SLF1Q9BQI6 1058 aa12.11□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KIF13BQ9NQT8 1826 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 BICDL2A1A5D9 508 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 USP17L5A8MUK1 530 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TULP1O00294 542 aaPredicted RBP12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CDK17Q00537 523 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PSMD2Q13200 908 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 STIM1Q13586 685 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TATDN1Q6P1N9 297 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CABP7Q86V35 215 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TRIM9Q9C026 710 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NYAP2Q9P242 653 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 HDAC6Q9UBN7 1215 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TRIM10Q9UDY6 481 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ADGRG1Q9Y653 693 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ATP2C2O75185 946 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CCT5P48643 541 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TMEM119Q4V9L6 283 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 STRIP1Q5VSL9 837 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 LRRC15Q8TF66 581 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 DCAF4Q8WV16 495 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 DNAJC7Q99615 494 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MTMR7Q9Y216 660 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 A0A1W2PQJ5 194 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CCDC175P0C221 793 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 MMP14P50281 582 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 GTF2IP78347 998 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 USP17L2Q6R6M4 530 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NOA1Q8NC60 698 aaKnown RBP12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 PIGSQ96S52 555 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 VPS16Q9H269 839 aa12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 DDX4Q9NQI0 724 aaKnown RBP12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 TTF2Q9UNY4 1162 aaKnown RBP12.1□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ATP8B1O43520 1251 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 EIF3JO75822 258 aaKnown RBP12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CCNE1P24864 410 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ADCY7P51828 1080 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ICE2Q659A1 982 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 CDC42EP5Q6NZY7 148 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 NUP58Q9BVL2 599 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 JMJD4Q9H9V9 463 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ERLIN1O75477 346 aa12.09□□□□□ -0.47
SENP3-EIF4A1-201ENST00000614237 ATP2B2Q01814 1243 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms