RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 KAT14Q9H8E8 782 aa24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 FBXO2Q9UK22 296 aaPredicted RBP24.46■■□□□ 1.51
POLR2J3-220ENST00000613744 ADM5C9JUS6 153 aa24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 ENTPD3O75355 529 aa24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 LIG3P49916 1009 aa24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 FAM151AQ8WW52 585 aa24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 GPBP1L1Q9HC44 474 aaPredicted RBP24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 ABHD10Q9NUJ1 306 aa24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 ANGEL1Q9UNK9 670 aaKnown RBP24.45■■□□□ 1.5
POLR2J3-220ENST00000613744 ACTN4O43707 911 aaKnown RBP24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 GGCXP38435 758 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 CUL4BQ13620 913 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 NCAPH2Q6IBW4 605 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 EHBP1Q8NDI1 1231 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 CAPS2Q9BXY5 557 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 ARPP21Q9UBL0 812 aaPredicted RBP24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 FAM196BA6NMK8 535 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 POLR2DO15514 142 aaKnown RBP24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 ERVK-24P63145 666 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 TNFAIP1Q13829 316 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 C12orf60Q5U649 245 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 MAP1SQ66K74 1059 aaPredicted RBP24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 IQCEQ6IPM2 695 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 CPLX3Q8WVH0 158 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 WASF1Q92558 559 aa24.44■■□□□ 1.5
POLR2J3-220ENST00000613744 AGPSO00116 658 aa24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 TNNI2P48788 182 aa24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 RRP12Q5JTH9 1297 aaKnown RBP24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 FKBP1CQ5VVH2 108 aa24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 KCNV1Q6PIU1 500 aa24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 APOBEC3FQ8IUX4 373 aaKnown RBP24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 CSRNP1Q96S65 589 aa24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 TACC3Q9Y6A5 838 aa24.43■■□□□ 1.5
POLR2J3-220ENST00000613744 YY1P25490 414 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 FXR1P51114 621 aaKnown RBP eCLIP24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 SPAG1Q07617 926 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 RILPL1Q5EBL4 403 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 CCNI2Q6ZMN8 369 aaPredicted RBP24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 KRT26Q7Z3Y9 468 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 FAM83AQ86UY5 434 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 NOSTRINQ8IVI9 506 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 AMOTL1Q8IY63 956 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 SLC44A5Q8NCS7 719 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 CEP131Q9UPN4 1083 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 SAR1BQ9Y6B6 198 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 GOLGA6BA6NDN3 693 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 LRRC10BA6NIK2 292 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 SKOR1P84550 965 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 AKNAD1Q5T1N1 836 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 MFSD6Q6ZSS7 791 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 SULF1Q8IWU6 871 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 SELENOOQ9BVL4 669 aa24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 GLIS2Q9BZE0 524 aaPredicted RBP24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 LIMA1Q9UHB6 759 aaKnown RBP24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 DDX60LQ5H9U9 1706 aaKnown RBP24.42■■□□□ 1.5
POLR2J3-220ENST00000613744 OPA1O60313 960 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 PRDM1O75626 825 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 EPB41P11171 864 aaKnown RBP24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 SBK1Q52WX2 424 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 CCDC70Q6NSX1 233 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 MIGA2Q7L4E1 593 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 BCAS4Q8TDM0 211 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 CABS1Q96KC9 395 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 AIFM3Q96NN9 605 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 SH3GL2Q99962 352 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 SRPRBQ9Y5M8 271 aaKnown RBP24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 B4E1Z4 1266 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 SH2B2O14492 632 aaPredicted RBP24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 NPM3O75607 178 aaKnown RBP24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 FSBPO95073 299 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 NBPF12Q5TAG4 269 aaPredicted RBP24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 NKX2-3Q8TAU0 364 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 TEPSINQ96N21 525 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 PAGR1Q9BTK6 254 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 FAM184BQ9ULE4 1060 aa24.41■■□□□ 1.5
POLR2J3-220ENST00000613744 GRIN2DO15399 1336 aa24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 TFRCP02786 760 aaKnown RBP24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 HLA-DOAP06340 250 aa24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 SAFBQ15424 915 aaKnown RBP eCLIP24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 ZC3H15Q8WU90 426 aaKnown RBP24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 TMEM87BQ96K49 555 aa24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 GSDMAQ96QA5 445 aa24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 RNF216Q9NWF9 866 aaPredicted RBP24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 FZD1Q9UP38 647 aa24.4■■□□□ 1.5
POLR2J3-220ENST00000613744 MYH8P13535 1937 aa24.39■■□□□ 1.5
POLR2J3-220ENST00000613744 DHX36Q9H2U1 1008 aaKnown RBP24.39■■□□□ 1.5
POLR2J3-220ENST00000613744 PGAP2Q9UHJ9 254 aa24.39■■□□□ 1.5
POLR2J3-220ENST00000613744 PITPNM2Q9BZ72 1349 aa24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 ZEB2O60315 1214 aa24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 NTRK3Q16288 839 aa24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 AENQ8WTP8 325 aaKnown RBP24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 FOXP1Q9H334 677 aaPredicted RBP24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 ANAPC4Q9UJX5 808 aa24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 EPN1Q9Y6I3 576 aaPredicted RBP24.39■■□□□ 1.49
POLR2J3-220ENST00000613744 ANO9A1A5B4 782 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 APOA5Q6Q788 366 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 YTHDF3Q7Z739 585 aaKnown RBP24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 CRACR2BQ8N4Y2 399 aaPredicted RBP24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 MMS19Q96T76 1030 aa24.38■■□□□ 1.49
POLR2J3-220ENST00000613744 PI4KBQ9UBF8 816 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms