RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 UBA5Q9GZZ9 404 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 FAM107BQ9H098 131 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 ZNF287Q9HBT7 754 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 HOOK1Q9UJC3 728 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 MYO1FO00160 1098 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 GYPCP04921 128 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 SSBP05455 408 aaKnown RBP eCLIP13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 PPP2R5AQ15172 486 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 CIAPIN1Q6FI81 312 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 SH3BP5LQ7L8J4 393 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 ENOX1Q8TC92 643 aaKnown RBP13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 SLC24A3Q9HC58 644 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 SPON1Q9HCB6 807 aa13.13□□□□□ -0.31
PPP4R3B-204ENST00000612688 FAM170AA1A519 330 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 TRIM75PA6NK02 468 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 PCP11498 1178 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 HNRNPH1P31943 449 aaKnown RBP13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 ERVK-24P63145 666 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 PTGDRQ13258 359 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 EFCAB13Q8IY85 973 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 MLKLQ8NB16 471 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 GPKOWQ92917 476 aaPredicted RBP eCLIP13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 CSRNP1Q96S65 589 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 PSMB7Q99436 277 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 TMOD2Q9NZR1 351 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 CAPN7Q9Y6W3 813 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 GOLGA6L9A6NEM1 432 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 PPFIA4O75335 1185 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 CTAGE8P0CG41 777 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 PRELPP51888 382 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 TBC1D10BQ4KMP7 808 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 RILPL1Q5EBL4 403 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 CTAGE4Q8IX94 777 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 UIMC1Q96RL1 719 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 TMEM39BQ9GZU3 492 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 FAM169AQ9Y6X4 670 aa13.12□□□□□ -0.31
PPP4R3B-204ENST00000612688 VIL1P09327 827 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 TMED8Q6PL24 325 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 CD248Q9HCU0 757 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SRPRBQ9Y5M8 271 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 CLGNO14967 610 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 DEXIO95424 95 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SARSP49591 514 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 PRAMEF18Q5VWM3 479 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 APTXQ7Z2E3 356 aaKnown RBP13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 DNAJC18Q9H819 358 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 CD2APQ9Y5K6 639 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 SHMT1P34896 483 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 KLK7P49862 253 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 KRT31Q15323 416 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 ILDR2Q71H61 639 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 FAM71BQ8TC56 605 aa13.11□□□□□ -0.31
PPP4R3B-204ENST00000612688 MYH1P12882 1939 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 A0A1B0GTH6 734 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 USP17L5A8MUK1 530 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 NKRFO15226 690 aaKnown RBP eCLIP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 ZEB2O60315 1214 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 GGCXP38435 758 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 CCDC84Q86UT8 332 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 NEDD1Q8NHV4 660 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 CDC23Q9UJX2 597 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 A0A087WUV0 522 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 PPP1R3GB7ZBB8 358 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 EBAG9O00559 213 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 MFAP3LO75121 409 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 KRT9P35527 623 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 MATR3P43243 847 aaKnown RBP eCLIP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 DNA2P51530 1060 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 SF3A3Q12874 501 aaKnown RBP eCLIP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 DGKHQ86XP1 1220 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 GIMAP7Q8NHV1 300 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 ZNF70Q9UC06 446 aaPredicted RBP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 ADD3Q9UEY8 706 aaKnown RBP13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 MAST2Q6P0Q8 1798 aa13.1□□□□□ -0.31
PPP4R3B-204ENST00000612688 SLC16A2P36021 539 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 UBXN1Q04323 297 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 ZYXQ15942 572 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 PKN1Q16512 942 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 CERKLQ49MI3 558 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 HNRNPLLQ8WVV9 542 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 HPS3Q969F9 1004 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 MTRQ99707 1265 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 PI4KBQ9UBF8 816 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 DUSP10Q9Y6W6 482 aa13.09□□□□□ -0.31
PPP4R3B-204ENST00000612688 KLRF2D3W0D1 207 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms