RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 FSCN1Q16658 493 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 DUSP28Q4G0W2 176 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 HABP4Q5JVS0 413 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 FANCBQ8NB91 859 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 KLHDC9Q8NEP7 349 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 OR6J1Q8NGC5 347 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 SMARCC2Q8TAQ2 1214 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 JAKMIP1Q96N16 626 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 PURBQ96QR8 312 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 LRRC2Q9BYS8 371 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 POLR3EQ9NVU0 708 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 LCTP09848 1927 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 A0A0U1RQG5 324 aaPredicted RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 KPNA6O60684 536 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 TXNP10599 105 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 SMPD1P17405 629 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 HSD17B4P51659 736 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 SNX17Q15036 470 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 RTN1Q16799 776 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 TRIM60Q495X7 471 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 TAPT1Q6NXT6 567 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 KCNV1Q6PIU1 500 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 TAAR1Q96RJ0 339 aa14.24□□□□□ -0.13
CBWD3-208ENST00000612050 UBE2OQ9C0C9 1292 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 GNEQ9Y223 722 aaKnown RBP14.24□□□□□ -0.13
CBWD3-208ENST00000612050 ASTN1O14525 1302 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.23□□□□□ -0.13
CBWD3-208ENST00000612050 PQBP1O60828 265 aaKnown RBP14.23□□□□□ -0.13
CBWD3-208ENST00000612050 EIF3JO75822 258 aaKnown RBP14.23□□□□□ -0.13
CBWD3-208ENST00000612050 EIF2AK2P19525 551 aaKnown RBP14.23□□□□□ -0.13
CBWD3-208ENST00000612050 RXRAP19793 462 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 EDNRBP24530 442 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 CCND2P30279 289 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 RCAN1P53805 252 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 APOA5Q6Q788 366 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 EHMT1Q9H9B1 1298 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 PDGFCQ9NRA1 345 aa14.23□□□□□ -0.13
CBWD3-208ENST00000612050 MKI67P46013 3256 aaKnown RBP14.22□□□□□ -0.13
CBWD3-208ENST00000612050 KLF18A0A0U1RQI7 1052 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 RBM47A0AV96 593 aaKnown RBP14.22□□□□□ -0.13
CBWD3-208ENST00000612050 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 CYTH3O43739 400 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 NR3C2P08235 984 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 CLTBP09497 229 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 MYCLP12524 364 aaPredicted RBP14.22□□□□□ -0.13
CBWD3-208ENST00000612050 BMP8BP34820 402 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 NKX3-2P78367 333 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 BEX3Q00994 111 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 AKAP17AQ02040 695 aaKnown RBP14.22□□□□□ -0.13
CBWD3-208ENST00000612050 ADCK5Q3MIX3 580 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 GNPTABQ3T906 1256 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 SEPT14Q6ZU15 432 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 FCHSD1Q86WN1 690 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 RASEFQ8IZ41 740 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 MRVI1Q9Y6F6 885 aa14.22□□□□□ -0.13
CBWD3-208ENST00000612050 PPP1R11O60927 126 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 STAM2O75886 525 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 GH1P01241 217 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 RAG1P15918 1043 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 CASTP20810 708 aaKnown RBP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 HOXA13P31271 388 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 MAGEA10P43363 369 aaPredicted RBP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 EXOSC10Q01780 885 aaKnown RBP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 GHRHRQ02643 423 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 TLE2Q04725 743 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 TMTC3Q6ZXV5 915 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 CCDC82Q8N4S0 544 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 TBC1D5Q92609 795 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 TCEANC2Q96MN5 208 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 TOX2Q96NM4 488 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 TMEM39AQ9NV64 488 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 RBM27Q9P2N5 1060 aaKnown RBP14.21□□□□□ -0.13
CBWD3-208ENST00000612050 SNX14Q9Y5W7 946 aa14.21□□□□□ -0.13
CBWD3-208ENST00000612050 MYADML2A6NDP7 307 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 SPDYE3A6NKU9 549 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 hCG_1984214I3L0E3 225 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 ARVCFO00192 962 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 ADCY6O43306 1168 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 PLEKHA8P1O95397 391 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 MYL3P08590 195 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 MDM2Q00987 491 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-208ENST00000612050 CCSAPQ6IQ19 270 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-208ENST00000612050 CXCL17Q6UXB2 119 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 Q6ZUG5 572 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 HEATR3Q7Z4Q2 680 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 RAB11FIP4Q86YS3 637 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 SRBD1Q8N5C6 995 aaKnown RBP14.2□□□□□ -0.14
CBWD3-208ENST00000612050 ZNF713Q8N859 430 aaPredicted RBP14.2□□□□□ -0.14
CBWD3-208ENST00000612050 KCNB2Q92953 911 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 PDCD2LQ9BRP1 358 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 GLT8D2Q9H1C3 349 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 CYP46A1Q9Y6A2 500 aa14.2□□□□□ -0.14
CBWD3-208ENST00000612050 DDX49Q9Y6V7 483 aaKnown RBP14.2□□□□□ -0.14
CBWD3-208ENST00000612050 BAZ2BQ9UIF8 2168 aaKnown RBP14.2□□□□□ -0.14
CBWD3-208ENST00000612050 KIAA1217Q5T5P2 1943 aa14.19□□□□□ -0.14
CBWD3-208ENST00000612050 RPS6KB1P23443 525 aa14.19□□□□□ -0.14
CBWD3-208ENST00000612050 PGM5Q15124 567 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms