RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 EEF2P13639 858 aaKnown RBP14.52□□□□□ -0.09
TCF3-220ENST00000611869 FKBP3Q00688 224 aaKnown RBP14.52□□□□□ -0.09
TCF3-220ENST00000611869 SBK1Q52WX2 424 aa14.52□□□□□ -0.09
TCF3-220ENST00000611869 PODNQ7Z5L7 613 aa14.52□□□□□ -0.09
TCF3-220ENST00000611869 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
TCF3-220ENST00000611869 WTIPA6NIX2 430 aaPredicted RBP14.52□□□□□ -0.09
TCF3-220ENST00000611869 SYDE2Q5VT97 1194 aa14.52□□□□□ -0.09
TCF3-220ENST00000611869 ARMCX5Q6P1M9 558 aa14.52□□□□□ -0.09
TCF3-220ENST00000611869 FOXP4Q8IVH2 680 aaPredicted RBP14.52□□□□□ -0.09
TCF3-220ENST00000611869 RIOK1Q9BRS2 568 aaKnown RBP14.52□□□□□ -0.09
TCF3-220ENST00000611869 MXD3Q9BW11 206 aa14.52□□□□□ -0.09
TCF3-220ENST00000611869 CYP27A1Q02318 531 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 FMR1Q06787 632 aaKnown RBP eCLIP14.51□□□□□ -0.093e-6■■□□□ 12.2
TCF3-220ENST00000611869 KLHL7Q8IXQ5 586 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 ZNF772Q68DY9 489 aaPredicted RBP14.51□□□□□ -0.09
TCF3-220ENST00000611869 NUCKS1Q9H1E3 243 aaKnown RBP14.51□□□□□ -0.09
TCF3-220ENST00000611869 CLEC11AQ9Y240 323 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 FLT1P17948 1338 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 ZBTB5O15062 677 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 TDP2O95551 362 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 NF2P35240 595 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 STAT2P52630 851 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 TBC1D10BQ4KMP7 808 aaPredicted RBP14.51□□□□□ -0.09
TCF3-220ENST00000611869 SLC27A3Q5K4L6 730 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 NLRX1Q86UT6 975 aa14.51□□□□□ -0.09
TCF3-220ENST00000611869 TCRBV5S4A2TA0A5A2 114 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 MFAP3LO75121 409 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 AOC3Q16853 763 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 TOGARAM2Q6ZUX3 1019 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 LRP10Q7Z4F1 713 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 SP8Q8IXZ3 490 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 DHX37Q8IY37 1157 aaKnown RBP14.5□□□□□ -0.09
TCF3-220ENST00000611869 TRIM58Q8NG06 486 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 IQCDQ96DY2 449 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 FUCA2Q9BTY2 467 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 SYNCQ9H7C4 482 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 CDC23Q9UJX2 597 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 OPA1O60313 960 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 PLA2G4BP0C869 781 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 ABCB4P21439 1286 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 MAN2A1Q16706 1144 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 WHAMMP3Q1A5X7 153 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 ODR4Q5SWX8 454 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 DPH6Q7L8W6 267 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 POLD4Q9HCU8 107 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 ECE2O60344 883 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 CFAP58Q5T655 872 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 TTBK2Q6IQ55 1244 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 TMEM179Q6ZVK1 233 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 IFT74Q96LB3 600 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 RASA1P20936 1047 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 U2AF1L4Q8WU68 220 aaKnown RBP14.5□□□□□ -0.09
TCF3-220ENST00000611869 DDX12PQ92771 950 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 TEKT3Q9BXF9 490 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 TRIM31Q9BZY9 425 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 TUBE1Q9UJT0 475 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 PCDHA6Q9UN73 950 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 PCDHA8Q9Y5H6 950 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 CAMTA1Q9Y6Y1 1673 aa14.5□□□□□ -0.09
TCF3-220ENST00000611869 KNDC1Q76NI1 1749 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 CLIC2O15247 247 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 SPOPO43791 374 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 STAT1P42224 750 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 RPS6KA1Q15418 735 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 PANX2Q96RD6 677 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 CTTNBP2NLQ9P2B4 639 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 LARSQ9P2J5 1176 aaKnown RBP14.49□□□□□ -0.09
TCF3-220ENST00000611869 RSPH14Q9UHP6 348 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 ATP6V0A2Q9Y487 856 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 CNTNAP5Q8WYK1 1306 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 KDM4FA0A1W2PPD8 638 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 ANKRD62A6NC57 917 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 K7ENM7 598 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 PTPAQ15257 358 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 RNF187Q5TA31 235 aaPredicted RBP14.49□□□□□ -0.09
TCF3-220ENST00000611869 ARHGEF16Q5VV41 709 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 CCDC50Q8IVM0 306 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 VGLL2Q8N8G2 317 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 THAP9Q9H5L6 903 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 NFAT5O94916 1531 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 PHLPP2Q6ZVD8 1323 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 TNS2Q63HR2 1409 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 TLDC2A0PJX2 215 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 AP5Z1O43299 807 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 RASSF7Q02833 373 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 NTRK3Q16288 839 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 XKR9Q5GH70 373 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 GBP6Q6ZN66 633 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 ADGRF4Q8IZF3 695 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 ZNF577Q9BSK1 485 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 EMILIN3Q9NT22 766 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 ANAPC4Q9UJX5 808 aa14.49□□□□□ -0.09
TCF3-220ENST00000611869 SMIM23A6NLE4 172 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 FAM102BQ5T8I3 360 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 PEX26Q7Z412 305 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 MB21D1Q8N884 522 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 RIC8AQ9NPQ8 531 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 EXOC7Q9UPT5 735 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 NDUFA10O95299 355 aa14.48□□□□□ -0.09
TCF3-220ENST00000611869 OAS2P29728 719 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms