RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 RBBP6Q7Z6E9 1792 aaKnown RBP10.14□□□□□ -0.79
SMAD4-217ENST00000611848 LCTP09848 1927 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 SYNGAP1Q96PV0 1343 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 ASB14A6NK59 587 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 hCG_1984214I3L0E3 225 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 F13A1P00488 732 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 GJB1P08034 283 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 CCL5P13501 91 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 CYP2C19P33261 490 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 CCT2P78371 535 aaKnown RBP10.14□□□□□ -0.79
SMAD4-217ENST00000611848 CNTN2Q02246 1040 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 GHRHRQ02643 423 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 FUT2Q10981 343 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 TRIM32Q13049 653 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 ZNF713Q8N859 430 aaPredicted RBP10.14□□□□□ -0.79
SMAD4-217ENST00000611848 NECAB1Q8N987 351 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 DNERQ8NFT8 737 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 FGD4Q96M96 766 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 PANK2Q9BZ23 570 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 UNC93B1Q9H1C4 597 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 MTMR6Q9Y217 621 aa10.14□□□□□ -0.79
SMAD4-217ENST00000611848 SOWAHBA6NEL2 793 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 B4DLN1 442 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 PRPF3O43395 683 aaKnown RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 MYCP01106 439 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 IFNAR1P17181 557 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 CALML3P27482 149 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 MRPL12P52815 198 aaKnown RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 NTRK3Q16288 839 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 CPLX2Q6PUV4 134 aaKnown RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 SLC30A10Q6XR72 485 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 MPHOSPH6Q99547 160 aaKnown RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 PAK6Q9NQU5 681 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 CNPY2Q9Y2B0 182 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
SMAD4-217ENST00000611848 V9GY48 417 aaPredicted RBP10.13□□□□□ -0.79
SMAD4-217ENST00000611848 hCG_1642624A0A1W2PR95 340 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 GCOM1H8Y6P7 765 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 CPLX1O14810 134 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 MSCO60682 206 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 PFKFB2O60825 505 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 SNAI1O95863 264 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 CFBP00751 764 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 POLR2MP0CAP2 368 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 CYBAP13498 195 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 NCLP19338 710 aaKnown RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 HSD17B4P51659 736 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 AKAP17AQ02040 695 aaKnown RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 ARMCX2Q7L311 632 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 TEX2Q8IWB9 1127 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 SYTL5Q8TDW5 730 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 TBC1D5Q92609 795 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 RNF26Q9BY78 433 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 ABHD16BQ9H3Z7 469 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 NCOA5Q9HCD5 579 aaKnown RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
SMAD4-217ENST00000611848 TMEM63CQ9P1W3 806 aa10.12□□□□□ -0.79
SMAD4-217ENST00000611848 OPLAHO14841 1288 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 CDKL5O76039 1030 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SGPL1O95470 568 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PDCP20941 246 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 CCND3P30281 292 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 GJA8P48165 433 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 ALDH5A1P51649 535 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 STK3Q13188 491 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PFKFB3Q16875 520 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PPP1R18Q6NYC8 613 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 HEATR3Q7Z4Q2 680 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 TRIM22Q8IYM9 498 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 MORC4Q8TE76 937 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 NSUN6Q8TEA1 469 aaKnown RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 CUL5Q93034 780 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 GTF3C6Q969F1 213 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 DEFB118Q96PH6 123 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SSUH2Q9Y2M2 353 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 POTEFA5A3E0 1075 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SEPT4O43236 478 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 ZNF865P0CJ78 1059 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SCG2P13521 617 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 CNGA1P29973 690 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SOX10P56693 466 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SSRP1Q08945 709 aaKnown RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SCRN1Q12765 414 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 ACVR2BQ13705 512 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PRAMEF19Q5SWL8 479 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 TRPV1Q8NER1 839 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 U2AF1L4Q8WU68 220 aaKnown RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 CCDC12Q8WUD4 166 aaPredicted RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PHKBQ93100 1093 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
SMAD4-217ENST00000611848 RMDN3Q96TC7 470 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 SLC26A6Q9BXS9 759 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 GLT8D2Q9H1C3 349 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 PSTPIP2Q9H939 334 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 BARHL2Q9NY43 387 aa10.11□□□□□ -0.79
SMAD4-217ENST00000611848 ASTN1O14525 1302 aa10.1□□□□□ -0.79
SMAD4-217ENST00000611848 GADD45BO75293 160 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms