RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 IQCF3P0C7M6 154 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 HOXD11P31277 338 aaPredicted RBP13.93□□□□□ -0.18
FDPS-220ENST00000611010 GRB10Q13322 594 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 CCDC96Q2M329 555 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 SYDE2Q5VT97 1194 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 HERC6Q8IVU3 1022 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 DCAF4Q8WV16 495 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 ARNTL2Q8WYA1 636 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
FDPS-220ENST00000611010 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
FDPS-220ENST00000611010 LRFN3Q9BTN0 628 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 ANAPC4Q9UJX5 808 aa13.93□□□□□ -0.18
FDPS-220ENST00000611010 A6NJR5 290 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 CPT1AP50416 773 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 SKIV2LQ15477 1246 aaKnown RBP13.92□□□□□ -0.18
FDPS-220ENST00000611010 FAM47CQ5HY64 1035 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 IL27Q8NEV9 243 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 GDPD5Q8WTR4 605 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 FAM122AQ96E09 287 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 GPATCH3Q96I76 525 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 TMEM47Q9BQJ4 181 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 CD320Q9NPF0 282 aa13.92□□□□□ -0.18
FDPS-220ENST00000611010 DOCK5Q9H7D0 1870 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 PTPDC1A2A3K4 754 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 ORC4O43929 436 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 SUPT20HL2P0C7V6 817 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 PDHBP11177 359 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 CALML3P27482 149 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 RFC2P35250 354 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 RPS6P62753 249 aaKnown RBP13.91□□□□□ -0.18
FDPS-220ENST00000611010 DEFB103AP81534 67 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 NFRKBQ6P4R8 1299 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 CENPQQ7L2Z9 268 aaPredicted RBP13.91□□□□□ -0.18
FDPS-220ENST00000611010 GPCPD1Q9NPB8 672 aa13.91□□□□□ -0.18
FDPS-220ENST00000611010 ADD3Q9UEY8 706 aaKnown RBP13.91□□□□□ -0.18
FDPS-220ENST00000611010 LOC102724159A0A0B4J2E5 919 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 RANBP6O60518 1105 aaKnown RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 SLC3A2P08195 630 aaKnown RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 WDR5P61964 334 aaKnown RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 PPP2R5BQ15173 497 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 PWP2Q15269 919 aaKnown RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 GDF6Q6KF10 455 aaPredicted RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 PHOSPHO2Q8TCD6 241 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 KAT2BQ92831 832 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 C1QTNF1Q9BXJ1 281 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 TSPYL2Q9H2G4 693 aaPredicted RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 CPVLQ9H3G5 476 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 CHMP4BQ9H444 224 aaKnown RBP13.9□□□□□ -0.18
FDPS-220ENST00000611010 PCDHB15Q9Y5E8 787 aa13.9□□□□□ -0.18
FDPS-220ENST00000611010 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 GTPBP6O43824 516 aaPredicted RBP13.89□□□□□ -0.19
FDPS-220ENST00000611010 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 AAK1Q2M2I8 961 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 TRAF7Q6Q0C0 670 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 RNF207Q6ZRF8 634 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 WNT8BQ93098 351 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 COL20A1Q9P218 1284 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 RALGAPA2Q2PPJ7 1873 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 WDR19Q8NEZ3 1342 aa13.89□□□□□ -0.19
FDPS-220ENST00000611010 A0A0D9SFI3 127 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 NBNO60934 754 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 BAIAP3O94812 1187 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 MMP3P08254 477 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 TOP1P11387 765 aaKnown RBP13.88□□□□□ -0.19
FDPS-220ENST00000611010 ACTN1P12814 892 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 PTPN11Q06124 597 aaPredicted RBP13.88□□□□□ -0.19
FDPS-220ENST00000611010 ARHGAP1Q07960 439 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 PDE4DQ08499 809 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 RBL2Q08999 1139 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 PPP4R3BQ5MIZ7 849 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 SCFD2Q8WU76 684 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 TBC1D5Q92609 795 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 COG5Q9UP83 839 aa13.88□□□□□ -0.19
FDPS-220ENST00000611010 NKRFO15226 690 aaKnown RBP eCLIP13.87□□□□□ -0.19
FDPS-220ENST00000611010 CXCL10P02778 98 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 TXNP10599 105 aaKnown RBP13.87□□□□□ -0.19
FDPS-220ENST00000611010 MX1P20591 662 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 MKRN4PQ13434 485 aaPredicted RBP13.87□□□□□ -0.19
FDPS-220ENST00000611010 HIC1Q14526 733 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 MBTPS1Q14703 1052 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 ALX1Q15699 326 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 PTGISQ16647 500 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
FDPS-220ENST00000611010 SESTD1Q86VW0 696 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 TBC1D10CQ8IV04 446 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 HLA-CQ95604 372 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 FAM227BQ96M60 508 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 FTOQ9C0B1 505 aaKnown RBP eCLIP13.87□□□□□ -0.19
FDPS-220ENST00000611010 COL4A6Q14031 1691 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 C5orf42Q9H799 3197 aa13.87□□□□□ -0.19
FDPS-220ENST00000611010 FGAP02671 866 aa13.86□□□□□ -0.19
FDPS-220ENST00000611010 LY6KQ17RY6 165 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms