RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SPOPO43791 374 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 DLATP10515 647 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 NR2F2P24468 414 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CASP14P31944 242 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 RESP18Q5W5W9 173 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CACTINQ8WUQ7 758 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 TSC1Q92574 1164 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 IFIH1Q9BYX4 1025 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 BHMT2Q9H2M3 363 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 SH3GLB2Q9NR46 395 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 BARHL2Q9NY43 387 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 MTMR4Q9NYA4 1195 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 ZNRF3Q9ULT6 936 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 IKBKBO14920 756 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CLIC2O15247 247 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 FDPSP14324 419 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CD19P15391 556 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 GBP2P32456 591 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 POLR2FP61218 127 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 PPP2R3AQ06190 1150 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CTTNQ14247 550 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 ARMCX5Q6P1M9 558 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 DCAF4Q8WV16 495 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 SECISBP2LQ93073 1101 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 P2RX5Q93086 422 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 WDR11Q9BZH6 1224 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 RAVER2Q9HCJ3 691 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 RNF181Q9P0P0 153 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 PNMA2Q9UL42 364 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 PCDHA6Q9UN73 950 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 SUGT1Q9Y2Z0 365 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 PCDHA8Q9Y5H6 950 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 ADGRB2O60241 1585 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CTDNEP1O95476 244 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 RASA1P20936 1047 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 POLGP54098 1239 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-218ENST00000610726 CUL4BQ13620 913 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 RASA3Q14644 834 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 PTPROQ16827 1216 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 SBK1Q52WX2 424 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 ZNF658Q5TYW1 1059 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-218ENST00000610726 ANKRD13CQ8N6S4 541 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 MAGEF1Q9HAY2 307 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 SFI1A8K8P3 1242 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 UBE2Q2LH0YL09 131 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 FOXN1O15353 648 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 STX10O60499 249 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 GNA14O95837 355 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 PLA2G4BP0C869 781 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 DPEP1P16444 411 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 CA8P35219 290 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 LIG4P49917 911 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 KMT5BQ4FZB7 885 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 PRAMEF18Q5VWM3 479 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 DPP9Q86TI2 863 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 PIGOQ8TEQ8 1089 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 KIFAP3Q92845 792 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 IWS1Q96ST2 819 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 TSGA10Q9BZW7 698 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 CTTNBP2NLQ9P2B4 639 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 STK17AQ9UEE5 414 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 SEPT9Q9UHD8 586 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-218ENST00000610726 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.03□□□□□ -1.12
CSDE1-218ENST00000610726 BAZ2BQ9UIF8 2168 aaKnown RBP8.03□□□□□ -1.12
CSDE1-218ENST00000610726 TDP2O95551 362 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 BCRP11274 1271 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 ABCB4P21439 1286 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 STAT1P42224 750 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 SHC4Q6S5L8 630 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 ENOX1Q8TC92 643 aaKnown RBP8.03□□□□□ -1.12
CSDE1-218ENST00000610726 TNS2Q63HR2 1409 aa8.03□□□□□ -1.12
CSDE1-218ENST00000610726 KIAA0754O94854 1291 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 ARHGAP4P98171 946 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 FKBP3Q00688 224 aaKnown RBP8.02□□□□□ -1.12
CSDE1-218ENST00000610726 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 POTEDQ86YR6 584 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 FMNL3Q8IVF7 1028 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 CEP170P1Q96L14 293 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 NOX5Q96PH1 765 aa8.02□□□□□ -1.12
CSDE1-218ENST00000610726 C3P01024 1663 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 HNRNPDLO14979 420 aaKnown RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 DMP1Q13316 513 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 GSTA5Q7RTV2 222 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 ADGRA1Q86SQ6 560 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 PPM1KQ8N3J5 372 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 DHTKD1Q96HY7 919 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-218ENST00000610726 NACC1Q96RE7 527 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 GPR75-ASB3A0A0A6YYF3 556 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 CNGA1P29973 690 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 GBP6Q6ZN66 633 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 RNF207Q6ZRF8 634 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 CLEC17AQ6ZS10 378 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 CDAN1Q8IWY9 1227 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 MICALL2Q8IY33 904 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 POMGNT1Q8WZA1 660 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 ATP6V0A1Q93050 837 aa8.02□□□□□ -1.13
CSDE1-218ENST00000610726 RMDN3Q96TC7 470 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms