RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 STXBP2Q15833 593 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 SGMS1Q86VZ5 419 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 HOMER1Q86YM7 354 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 TDHQ8IZJ6 230 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 PIGSQ96S52 555 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 SLC12A7Q9Y666 1083 aa17.5■□□□□ 0.39
LMBR1-220ENST00000609081 KIAA1217Q5T5P2 1943 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 ARVCFO00192 962 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 CYTH3O43739 400 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 REC8O95072 547 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 CFBP00751 764 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 CDK7P50613 346 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 VTI1AQ96AJ9 217 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 RRP36Q96EU6 259 aaKnown RBP17.49■□□□□ 0.39
LMBR1-220ENST00000609081 PRDM5Q9NQX1 630 aaPredicted RBP17.49■□□□□ 0.39
LMBR1-220ENST00000609081 POLR3EQ9NVU0 708 aa17.49■□□□□ 0.39
LMBR1-220ENST00000609081 SEC63Q9UGP8 760 aaKnown RBP17.49■□□□□ 0.39
LMBR1-220ENST00000609081 OPLAHO14841 1288 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 KIAA0355O15063 1070 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 KPNA6O60684 536 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 PQBP1O60828 265 aaKnown RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 PPP1R11O60927 126 aaPredicted RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 EIF3JO75822 258 aaKnown RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 MDM2Q00987 491 aaPredicted RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 LRIT3Q3SXY7 679 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 DHX32Q7L7V1 743 aaKnown RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 TBC1D5Q92609 795 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 TAAR1Q96RJ0 339 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 PXMP2Q9NR77 195 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 PPP4R2Q9NY27 417 aa17.48■□□□□ 0.39
LMBR1-220ENST00000609081 DDX49Q9Y6V7 483 aaKnown RBP17.48■□□□□ 0.39
LMBR1-220ENST00000609081 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 GCOM1H8Y6P7 765 aaPredicted RBP17.47■□□□□ 0.39
LMBR1-220ENST00000609081 POLR2MP0CAP2 368 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 RCAN1P53805 252 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 BEX3Q00994 111 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 SLC35G1Q2M3R5 365 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 GPR153Q6NV75 609 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
LMBR1-220ENST00000609081 TMEM39AQ9NV64 488 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 COL20A1Q9P218 1284 aa17.47■□□□□ 0.39
LMBR1-220ENST00000609081 NR3C2P08235 984 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 TXNP10599 105 aaKnown RBP17.46■□□□□ 0.39
LMBR1-220ENST00000609081 EXOSC10Q01780 885 aaKnown RBP17.46■□□□□ 0.39
LMBR1-220ENST00000609081 FAAP100Q0VG06 881 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 CXCL17Q6UXB2 119 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 TEX2Q8IWB9 1127 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 FANCBQ8NB91 859 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 SLC43A3Q8NBI5 491 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 OR6J1Q8NGC5 347 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 KCNB2Q92953 911 aa17.46■□□□□ 0.39
LMBR1-220ENST00000609081 GPHNQ9NQX3 736 aaPredicted RBP17.46■□□□□ 0.39
LMBR1-220ENST00000609081 RBM28Q9NW13 759 aaKnown RBP17.46■□□□□ 0.39
LMBR1-220ENST00000609081 A6NJR5 290 aa17.45■□□□□ 0.38
LMBR1-220ENST00000609081 RAG1P15918 1043 aa17.45■□□□□ 0.38
LMBR1-220ENST00000609081 IRX5P78411 483 aaPredicted RBP17.45■□□□□ 0.38
LMBR1-220ENST00000609081 ITGA7Q13683 1181 aa17.45■□□□□ 0.38
LMBR1-220ENST00000609081 CCDC62Q6P9F0 684 aa17.45■□□□□ 0.38
LMBR1-220ENST00000609081 PDCD2LQ9BRP1 358 aa17.45■□□□□ 0.38
LMBR1-220ENST00000609081 MYL10Q9BUA6 226 aa17.45■□□□□ 0.38
LMBR1-220ENST00000609081 TRIM43BA6NCK2 446 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 STAM2O75886 525 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 GH1P01241 217 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 EIF2AK2P19525 551 aaKnown RBP17.44■□□□□ 0.38
LMBR1-220ENST00000609081 HSPA4P34932 840 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 APOA5Q6Q788 366 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 SH3RF1Q7Z6J0 888 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 FAM126BQ8IXS8 530 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 RASEFQ8IZ41 740 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 CUL5Q93034 780 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 TRIM43Q96BQ3 446 aaPredicted RBP17.44■□□□□ 0.38
LMBR1-220ENST00000609081 MTG1Q9BT17 334 aaPredicted RBP17.44■□□□□ 0.38
LMBR1-220ENST00000609081 TBX21Q9UL17 535 aa17.44■□□□□ 0.38
LMBR1-220ENST00000609081 SCN10AQ9Y5Y9 1956 aa17.43■□□□□ 0.38
LMBR1-220ENST00000609081 PIK3CDO00329 1044 aa17.43■□□□□ 0.38
LMBR1-220ENST00000609081 TGFB3P10600 412 aa17.43■□□□□ 0.38
LMBR1-220ENST00000609081 PURAQ00577 322 aaKnown RBP17.43■□□□□ 0.38
LMBR1-220ENST00000609081 VSIG10LQ86VR7 867 aa17.43■□□□□ 0.38
LMBR1-220ENST00000609081 MICU3Q86XE3 530 aa17.43■□□□□ 0.38
LMBR1-220ENST00000609081 SRBD1Q8N5C6 995 aaKnown RBP17.43■□□□□ 0.38
LMBR1-220ENST00000609081 BADQ92934 168 aa17.43■□□□□ 0.38
LMBR1-220ENST00000609081 EMID1Q96A84 441 aaPredicted RBP17.43■□□□□ 0.38
LMBR1-220ENST00000609081 ZBTB43O43298 467 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 PLEKHA8P1O95397 391 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 TIMP1P01033 207 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 CD4P01730 458 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 SUPT20HL2P0C7V6 817 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 PSMA5P28066 241 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 CCND2P30279 289 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 HOXA13P31271 388 aaPredicted RBP17.42■□□□□ 0.38
LMBR1-220ENST00000609081 FGD1P98174 961 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 PGM5Q15124 567 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 ADCK5Q3MIX3 580 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 XRRA1Q6P2D8 792 aa17.42■□□□□ 0.38
LMBR1-220ENST00000609081 SEPT14Q6ZU15 432 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms