RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 CFAP36Q96G28 342 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 CCDC42Q96M95 316 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 JAKMIP1Q96N16 626 aaKnown RBP5.19□□□□□ -1.58
HDDC2-208ENST00000609021 FERD3LQ96RJ6 166 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 HNRNPABQ99729 332 aaKnown RBP5.19□□□□□ -1.58
HDDC2-208ENST00000609021 EMC3Q9P0I2 261 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 EFR3BQ9Y2G0 817 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 SLC4A4Q9Y6R1 1079 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 PHRF1Q9P1Y6 1649 aaKnown RBP5.19□□□□□ -1.58
HDDC2-208ENST00000609021 NDC80O14777 642 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 ACSL4O60488 711 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 NMT2O60551 498 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 PAHP00439 452 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 PCP11498 1178 aaKnown RBP5.19□□□□□ -1.58
HDDC2-208ENST00000609021 TUBB4BP68371 445 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 C1orf228Q6PIY5 440 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 PTF1AQ7RTS3 328 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 PNMA8AQ86V59 439 aaPredicted RBP5.19□□□□□ -1.58
HDDC2-208ENST00000609021 PPFIBP2Q8ND30 876 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 C7orf57Q8NEG2 295 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 TOR1AIP2Q8NFQ8 470 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 NPLOC4Q8TAT6 608 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 ACSBG1Q96GR2 724 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 L2HGDHQ9H9P8 463 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 NDFIP2Q9NV92 336 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 MOSPD1Q9UJG1 213 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 SLC30A1Q9Y6M5 507 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 INSRP06213 1382 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 MAP3K5Q99683 1374 aa5.19□□□□□ -1.58
HDDC2-208ENST00000609021 GTPBP10A4D1E9 387 aaKnown RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 GRXCR2A6NFK2 248 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 GOLGA8CPA6NN73 597 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 GOLGA8MH3BSY2 632 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PSMD14O00487 310 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ANXA13P27216 316 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 HSD17B7P56937 341 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 USP46P62068 366 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 GNGT1P63211 74 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PIP4K2BP78356 416 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 STK3Q13188 491 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 MSLNQ13421 630 aaPredicted RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 CAMK2BQ13554 666 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ZNF804AQ7Z570 1209 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 CCDC13Q8IYE1 715 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 IFT81Q8WYA0 676 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 CATSPER2Q96P56 530 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 FTOQ9C0B1 505 aaKnown RBP eCLIP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 MIS12Q9H081 205 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PALMDQ9NP74 551 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 TYW1Q9NV66 732 aaKnown RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 INTUQ9ULD6 942 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ZBTB1Q9Y2K1 713 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 DIP2AQ14689 1571 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 NCOA3Q9Y6Q9 1424 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 AKR1B15C9JRZ8 316 aaPredicted RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 STMND1H3BQB6 276 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SPTLC1O15269 473 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ZNF254O75437 659 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ABL1P00519 1130 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SERPINC1P01008 464 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ZSCAN22P10073 491 aaPredicted RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 MX1P20591 662 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SYT1P21579 422 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PCYT1AP49585 367 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 EVX2Q03828 476 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 POU5F1BQ06416 359 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PPFIA1Q13136 1202 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PROSER3Q2NL68 480 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 FAM20CQ8IXL6 584 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 LARGE2Q8N3Y3 721 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 BRSK1Q8TDC3 778 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 DQX1Q8TE96 717 aaKnown RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 NAF1Q96HR8 494 aaKnown RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 VPS50Q96JG6 964 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 TMEM87BQ96K49 555 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 TANGO6Q9C0B7 1094 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 CEP44Q9C0F1 390 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 C8orf4Q9NR00 106 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PCDH10Q9P2E7 1040 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 POLG2Q9UHN1 485 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SCOCQ9UIL1 159 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 CCPG1Q9ULG6 757 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 TTC7AQ9ULT0 858 aaPredicted RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 FAF1Q9UNN5 650 aaPredicted RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SNX5Q9Y5X3 404 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 TRPA1O75762 1119 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 LINGO3P0C6S8 592 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 DSTNP60981 165 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ZC3H6P61129 1189 aaKnown RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 KRT83P78385 493 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SKOR1P84550 965 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 FLIIQ13045 1269 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PDAP1Q13442 181 aaKnown RBP5.18□□□□□ -1.58
HDDC2-208ENST00000609021 PPP1R7Q15435 360 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 STK11Q15831 433 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 CRY1Q16526 586 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 KCTD16Q68DU8 428 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 SH3BP5LQ7L8J4 393 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 ERICH1Q86X53 443 aa5.18□□□□□ -1.58
HDDC2-208ENST00000609021 IFNL1Q8IU54 200 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms