RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 IMMTQ16891 758 aaKnown RBP25.55■■□□□ 1.68
TMEM248-207ENST00000607045 NBPF20Q3BBV1 942 aa25.55■■□□□ 1.68
TMEM248-207ENST00000607045 USP38Q8NB14 1042 aa25.55■■□□□ 1.68
TMEM248-207ENST00000607045 SCFD2Q8WU76 684 aa25.55■■□□□ 1.68
TMEM248-207ENST00000607045 GPHNQ9NQX3 736 aaPredicted RBP25.55■■□□□ 1.68
TMEM248-207ENST00000607045 COL20A1Q9P218 1284 aa25.55■■□□□ 1.68
TMEM248-207ENST00000607045 A6NJR5 290 aa25.54■■□□□ 1.68
TMEM248-207ENST00000607045 PDE4AP27815 886 aa25.54■■□□□ 1.68
TMEM248-207ENST00000607045 SYTL5Q8TDW5 730 aaPredicted RBP25.54■■□□□ 1.68
TMEM248-207ENST00000607045 MPHOSPH6Q99547 160 aaKnown RBP25.54■■□□□ 1.68
TMEM248-207ENST00000607045 JMJD4Q9H9V9 463 aa25.54■■□□□ 1.68
TMEM248-207ENST00000607045 TNKSO95271 1327 aa25.54■■□□□ 1.68
TMEM248-207ENST00000607045 NKRFO15226 690 aaKnown RBP eCLIP25.53■■□□□ 1.68
TMEM248-207ENST00000607045 QRICH1Q2TAL8 776 aa25.53■■□□□ 1.68
TMEM248-207ENST00000607045 STAG2Q8N3U4 1231 aa25.53■■□□□ 1.68
TMEM248-207ENST00000607045 PRDM12Q9H4Q4 367 aa25.53■■□□□ 1.68
TMEM248-207ENST00000607045 CTNNA3Q9UI47 895 aa25.53■■□□□ 1.68
TMEM248-207ENST00000607045 PARP1P09874 1014 aaKnown RBP25.52■■□□□ 1.68
TMEM248-207ENST00000607045 NT5C2P49902 561 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 ASPRV1Q53RT3 343 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 FAM47CQ5HY64 1035 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 CCDC62Q6P9F0 684 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 SEPT14Q6ZU15 432 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 RPUSD2Q8IZ73 545 aaKnown RBP25.52■■□□□ 1.68
TMEM248-207ENST00000607045 KRT23Q9C075 422 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 YBX2Q9Y2T7 364 aaKnown RBP25.52■■□□□ 1.68
TMEM248-207ENST00000607045 TTC28Q96AY4 2481 aa25.52■■□□□ 1.68
TMEM248-207ENST00000607045 B4DLN1 442 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 DHX16O60231 1041 aaKnown RBP25.51■■□□□ 1.67
TMEM248-207ENST00000607045 SUPT20HL2P0C7V6 817 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 MRPL12P52815 198 aaKnown RBP25.51■■□□□ 1.67
TMEM248-207ENST00000607045 RABGGTBP53611 331 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 TTLL4Q14679 1199 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 LY6KQ17RY6 165 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 BRDTQ58F21 947 aaPredicted RBP25.51■■□□□ 1.67
TMEM248-207ENST00000607045 NKX2-4Q9H2Z4 354 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 MSRAQ9UJ68 235 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 ABCB11O95342 1321 aa25.51■■□□□ 1.67
TMEM248-207ENST00000607045 CYB5R4Q7L1T6 521 aa25.5■■□□□ 1.67
TMEM248-207ENST00000607045 FBXO11Q86XK2 927 aa25.5■■□□□ 1.67
TMEM248-207ENST00000607045 RMDN3Q96TC7 470 aa25.5■■□□□ 1.67
TMEM248-207ENST00000607045 SUPT16HQ9Y5B9 1047 aaKnown RBP25.5■■□□□ 1.67
TMEM248-207ENST00000607045 KPNA6O60684 536 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 GSPT1P15170 499 aaKnown RBP25.49■■□□□ 1.67
TMEM248-207ENST00000607045 MYOGP15173 224 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 CHMP4BP1P59074 171 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 SEC23AQ15436 765 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 DEFB128Q7Z7B8 93 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 NSUN6Q8TEA1 469 aaKnown RBP25.49■■□□□ 1.67
TMEM248-207ENST00000607045 AFG1LQ8WV93 481 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 PPM1EQ8WY54 764 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 UBAC1Q9BSL1 405 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 MTIF3Q9H2K0 278 aaKnown RBP25.49■■□□□ 1.67
TMEM248-207ENST00000607045 PRDM6Q9NQX0 595 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 MRPL11Q9Y3B7 192 aaKnown RBP25.49■■□□□ 1.67
TMEM248-207ENST00000607045 SLC4A7Q9Y6M7 1214 aa25.49■■□□□ 1.67
TMEM248-207ENST00000607045 ADGRE1Q14246 886 aa25.48■■□□□ 1.67
TMEM248-207ENST00000607045 RAB30Q15771 203 aa25.48■■□□□ 1.67
TMEM248-207ENST00000607045 IFIT1BQ5T764 474 aaKnown RBP25.48■■□□□ 1.67
TMEM248-207ENST00000607045 NFRKBQ6P4R8 1299 aa25.48■■□□□ 1.67
TMEM248-207ENST00000607045 CHST3Q7LGC8 479 aa25.48■■□□□ 1.67
TMEM248-207ENST00000607045 MCF2L2Q86YR7 1114 aa25.48■■□□□ 1.67
TMEM248-207ENST00000607045 CNNM2Q9H8M5 875 aa25.48■■□□□ 1.67
TMEM248-207ENST00000607045 RAD50Q92878 1312 aa25.47■■□□□ 1.67
TMEM248-207ENST00000607045 ZBBXA8MT70 800 aa25.47■■□□□ 1.67
TMEM248-207ENST00000607045 STXBP2Q15833 593 aa25.47■■□□□ 1.67
TMEM248-207ENST00000607045 IWS1Q96ST2 819 aa25.47■■□□□ 1.67
TMEM248-207ENST00000607045 MAF1Q9H063 256 aa25.47■■□□□ 1.67
TMEM248-207ENST00000607045 REV3LO60673 3130 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 KLRF2D3W0D1 207 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 OPLAHO14841 1288 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 PPP1R11O60927 126 aaPredicted RBP25.46■■□□□ 1.67
TMEM248-207ENST00000607045 CFBP00751 764 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 PTH1RQ03431 593 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 ARHGAP1Q07960 439 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 TTC22Q5TAA0 569 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 ARHGEF16Q5VV41 709 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 GAS2L1Q99501 681 aaPredicted RBP25.46■■□□□ 1.67
TMEM248-207ENST00000607045 SLC28A3Q9HAS3 691 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 MAD2L2Q9UI95 211 aa25.46■■□□□ 1.67
TMEM248-207ENST00000607045 EIF2AK2P19525 551 aaKnown RBP25.45■■□□□ 1.66
TMEM248-207ENST00000607045 SLC35G1Q2M3R5 365 aa25.45■■□□□ 1.66
TMEM248-207ENST00000607045 KAT2BQ92831 832 aa25.45■■□□□ 1.66
TMEM248-207ENST00000607045 SENP2Q9HC62 589 aa25.45■■□□□ 1.66
TMEM248-207ENST00000607045 DDX41Q9UJV9 622 aaKnown RBP25.45■■□□□ 1.66
TMEM248-207ENST00000607045 RBAK-RBAKDNI3L0D1 243 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 EIF3JO75822 258 aaKnown RBP25.44■■□□□ 1.66
TMEM248-207ENST00000607045 GH1P01241 217 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 NR3C2P08235 984 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 MMP3P08254 477 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 IQCF3P0C7M6 154 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 PTPN11Q06124 597 aaPredicted RBP25.44■■□□□ 1.66
TMEM248-207ENST00000607045 MTMR8Q96EF0 704 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 AMNQ9BXJ7 453 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 PXMP2Q9NR77 195 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 TAF6LQ9Y6J9 622 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 SCN10AQ9Y5Y9 1956 aa25.44■■□□□ 1.66
TMEM248-207ENST00000607045 TRANK1O15050 2925 aa25.43■■□□□ 1.66
TMEM248-207ENST00000607045 PALM3A6NDB9 673 aaPredicted RBP25.43■■□□□ 1.66
TMEM248-207ENST00000607045 ATP2A2P16615 1042 aaKnown RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms