RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 GPR27Q9NS67 375 aa2.45□□□□□ -2.02
SNORA28-201ENST00000606769 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNORA28-201ENST00000606769 GULP1Q9UBP9 304 aa2.45□□□□□ -2.02
SNORA28-201ENST00000606769 TMA7Q9Y2S6 64 aaKnown RBP2.45□□□□□ -2.02
SNORA28-201ENST00000606769 RWDD3Q9Y3V2 267 aa2.45□□□□□ -2.02
SNORA28-201ENST00000606769 PCDHA9Q9Y5H5 950 aa2.45□□□□□ -2.02
SNORA28-201ENST00000606769 HCFC2Q9Y5Z7 792 aa2.45□□□□□ -2.02
SNORA28-201ENST00000606769 X6R8D5 127 aa2.45□□□□□ -2.02
SNORA28-201ENST00000606769 CCDC163A0A0D9SF12 145 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 SSU72P8A0A1W2PR75 194 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 FITM1A5D6W6 292 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 GSG1L2A8MUP6 293 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 AMY2AP04746 511 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 PRKCAP17252 672 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 AMY2BP19961 511 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 SDHBP21912 280 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 TACR1P25103 407 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 GABREP78334 506 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 DUSP4Q13115 394 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 KCNAB2Q13303 367 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 XP32Q5T750 250 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 HLA-DQA1Q5Y7H0 255 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 CREB3L3Q68CJ9 461 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 MAMDC2Q7Z304 686 aaPredicted RBP2.44□□□□□ -2.02
SNORA28-201ENST00000606769 ATG4DQ86TL0 474 aaPredicted RBP2.44□□□□□ -2.02
SNORA28-201ENST00000606769 THNSL2Q86YJ6 484 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 KSR1Q8IVT5 923 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 TEX2Q8IWB9 1127 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 SIRT2Q8IXJ6 389 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 DHX37Q8IY37 1157 aaKnown RBP2.44□□□□□ -2.02
SNORA28-201ENST00000606769 SH3RF2Q8TEC5 729 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 NINJ1Q92982 152 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 GPATCH3Q96I76 525 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 FEZ1Q99689 392 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 KCNK12Q9HB15 430 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 NDOR1Q9UHB4 597 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 SIT1Q9Y3P8 196 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 TELO2Q9Y4R8 837 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 PCDHA8Q9Y5H6 950 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 PCDHA2Q9Y5H9 948 aa2.44□□□□□ -2.02
SNORA28-201ENST00000606769 WTIPA6NIX2 430 aaPredicted RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 IRS4O14654 1257 aaPredicted RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 TBC1D8O95759 1140 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 FUCA1P04066 466 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 DBHP09172 617 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 POU3F2P20265 443 aaPredicted RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 ENDOUP21128 410 aaKnown RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 FBLN1P23142 703 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 MASP1P48740 699 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 MECP2P51608 486 aaKnown RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 CORO7P57737 925 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 ERVFRD-1P60508 538 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 CHRNEQ04844 493 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 PCBP1Q15365 356 aaKnown RBP eCLIP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 TCEA2Q15560 299 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 SEPT7Q16181 437 aaKnown RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 IQCEQ6IPM2 695 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 GALNT18Q6P9A2 607 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 RNF180Q86T96 592 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 IFNL3Q8IZI9 196 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 NAT16Q8N8M0 369 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 NUP43Q8NFH3 380 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 ABHD4Q8TB40 342 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 MYLIPQ8WY64 445 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 ZFYVE21Q9BQ24 234 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 TARS2Q9BW92 718 aaKnown RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 JAM3Q9BX67 310 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 IPPKQ9H8X2 491 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 RXFP1Q9HBX9 757 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 SMURF1Q9HCE7 757 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 PDLIM7Q9NR12 457 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 MARCH2Q9P0N8 246 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 KLHL14Q9P2G3 628 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 SFMBT1Q9UHJ3 866 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 CBLCQ9ULV8 474 aa2.43□□□□□ -2.02
SNORA28-201ENST00000606769 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 YBX2Q9Y2T7 364 aaKnown RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 TNPO3Q9Y5L0 923 aaKnown RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 TIMM13Q9Y5L4 95 aaPredicted RBP2.43□□□□□ -2.02
SNORA28-201ENST00000606769 TRBV23OR9-2A0A075B6M9 112 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 C22orf46C9J442 243 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 H7BY64 318 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 ZNF561-AS1K7EIQ3 104 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 TRAF5O00463 557 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 NKRFO15226 690 aaKnown RBP eCLIP2.42□□□□□ -2.02
SNORA28-201ENST00000606769 SGSM2O43147 1006 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 SRGAP3O43295 1099 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 NPHS1O60500 1241 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 TADA3O75528 432 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 GLRX3O76003 335 aaKnown RBP2.42□□□□□ -2.02
SNORA28-201ENST00000606769 SOD2P04179 222 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 NTRK1P04629 796 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 VIL1P09327 827 aaKnown RBP2.42□□□□□ -2.02
SNORA28-201ENST00000606769 PYGMP11217 842 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 PNLIPP16233 465 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 GRK2P25098 689 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 GRK3P35626 688 aa2.42□□□□□ -2.02
SNORA28-201ENST00000606769 RPL11P62913 178 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms