RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 LENG1Q96BZ8 264 aaPredicted RBP16.38■□□□□ 0.21
TUBE1-211ENST00000605457 RNF26Q9BY78 433 aaPredicted RBP16.38■□□□□ 0.21
TUBE1-211ENST00000605457 UPF2Q9HAU5 1272 aaKnown RBP16.38■□□□□ 0.21
TUBE1-211ENST00000605457 PXMP2Q9NR77 195 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
TUBE1-211ENST00000605457 FAM184BQ9ULE4 1060 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 MEIS2O14770 477 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PRPF3O43395 683 aaKnown RBP16.37■□□□□ 0.21
TUBE1-211ENST00000605457 RARBP10826 455 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 MLLT1Q03111 559 aaPredicted RBP16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PDE4DQ08499 809 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PFKFB3Q16875 520 aaPredicted RBP16.37■□□□□ 0.21
TUBE1-211ENST00000605457 TAPT1Q6NXT6 567 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 DIS3LQ8TF46 1054 aaKnown RBP16.37■□□□□ 0.21
TUBE1-211ENST00000605457 IWS1Q96ST2 819 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 BARHL2Q9NY43 387 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 FRMPD4Q14CM0 1322 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 B4DLN1 442 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 STXBP3O00186 592 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PFKFB2O60825 505 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 SCG2P13521 617 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 EIF2AK2P19525 551 aaKnown RBP16.37■□□□□ 0.21
TUBE1-211ENST00000605457 MRPL12P52815 198 aaKnown RBP16.37■□□□□ 0.21
TUBE1-211ENST00000605457 SCRN1Q12765 414 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PKN1Q16512 942 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 ARHGEF16Q5VV41 709 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 USP17L6PQ6QN14 398 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PSTPIP2Q9H939 334 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 XPNPEP3Q9NQH7 507 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 PDGFCQ9NRA1 345 aa16.37■□□□□ 0.21
TUBE1-211ENST00000605457 DOCK5Q9H7D0 1870 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.36■□□□□ 0.21
TUBE1-211ENST00000605457 CPLX1O14810 134 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 PPFIA3O75145 1194 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 DUSP11O75319 330 aaKnown RBP16.36■□□□□ 0.21
TUBE1-211ENST00000605457 ADCYAP1R1P41586 468 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 NAPAP54920 295 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 NOL8Q76FK4 1167 aaKnown RBP16.36■□□□□ 0.21
TUBE1-211ENST00000605457 FCHSD1Q86WN1 690 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 CUL5Q93034 780 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 PDCD2LQ9BRP1 358 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 SLC26A6Q9BXS9 759 aa16.36■□□□□ 0.21
TUBE1-211ENST00000605457 SLKQ9H2G2 1235 aaPredicted RBP16.36■□□□□ 0.21
TUBE1-211ENST00000605457 SYNRGQ9UMZ2 1314 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 DNM1LO00429 736 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 LARGE1O95461 756 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 PGM5Q15124 567 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 ME3Q16798 604 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 PAWRQ96IZ0 340 aaKnown RBP16.35■□□□□ 0.21
TUBE1-211ENST00000605457 TBC1D32Q96NH3 1257 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 BACH2Q9BYV9 841 aa16.35■□□□□ 0.21
TUBE1-211ENST00000605457 RBM47A0AV96 593 aaKnown RBP16.34■□□□□ 0.21
TUBE1-211ENST00000605457 ADAMTS4O75173 837 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 PGK1P00558 417 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 NR3C2P08235 984 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
TUBE1-211ENST00000605457 TNFAIP2Q03169 654 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 LRRC41Q15345 812 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 STXBP2Q15833 593 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 GJC2Q5T442 439 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-211ENST00000605457 IQSEC1Q6DN90 963 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 ARRDC4Q8NCT1 418 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 IL31RAQ8NI17 732 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 GNEQ9Y223 722 aaKnown RBP16.34■□□□□ 0.21
TUBE1-211ENST00000605457 COL6A1P12109 1028 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 SMPD1P17405 629 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 UBE2SQ16763 222 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
TUBE1-211ENST00000605457 NECAB2Q7Z6G3 386 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 SCFD2Q8WU76 684 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 GTF3C6Q969F1 213 aa16.34■□□□□ 0.21
TUBE1-211ENST00000605457 UPF3AQ9H1J1 476 aaKnown RBP16.34■□□□□ 0.21
TUBE1-211ENST00000605457 ADCY7P51828 1080 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 GJA9P57773 515 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 SSRP1Q08945 709 aaKnown RBP16.33■□□□□ 0.2
TUBE1-211ENST00000605457 DUSP28Q4G0W2 176 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 TMEM63BQ5T3F8 832 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 RNF180Q86T96 592 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 VSIG10LQ86VR7 867 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
TUBE1-211ENST00000605457 ESYT2A0FGR8 921 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 SMCO2A6NFE2 343 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 KBTBD13C9JR72 458 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 EIF3JO75822 258 aaKnown RBP16.32■□□□□ 0.2
TUBE1-211ENST00000605457 CDKL5O76039 1030 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 DEXIO95424 95 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 PTGS1P23219 599 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 CST5P28325 142 aaPredicted RBP16.32■□□□□ 0.2
TUBE1-211ENST00000605457 NKX3-2P78367 333 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 RABEP1Q15276 862 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 TLK2Q86UE8 772 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 CCDC12Q8WUD4 166 aaPredicted RBP16.32■□□□□ 0.2
TUBE1-211ENST00000605457 ZMYND12Q9H0C1 365 aa16.32■□□□□ 0.2
TUBE1-211ENST00000605457 C11orf49Q9H6J7 331 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms