RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 PTPDC1A2A3K4 754 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 LINC01553A4QN01 128 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 DCXO43602 365 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 KPNA6O60684 536 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 GJB5O95377 273 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SELPP16109 830 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 GNAT2P19087 354 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PDE4BQ07343 736 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 GPNMBQ14956 572 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RCSD1Q6JBY9 416 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SLC30A10Q6XR72 485 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CAGE1Q8TC20 777 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 AFAP1L1Q8TED9 768 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 FBXL18Q96ME1 805 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CRBNQ96SW2 442 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 MYH8P13535 1937 aa13.95□□□□□ -0.18
PDLIM1P1-201ENST00000604187 MCM3APO60318 1980 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 H3BQ06 376 aaPredicted RBP13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RBAK-RBAKDNI3L0D1 243 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 M0R2C6 588 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 NKRFO15226 690 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RNF113AO15541 343 aaKnown RBP13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CALML3P27482 149 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PDE4DQ08499 809 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 TCTN1Q2MV58 587 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 FAM117BQ6P1L5 589 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 IFNL3Q8IZI9 196 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SCFD2Q8WU76 684 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CTAGE1Q96RT6 745 aa13.94□□□□□ -0.18
PDLIM1P1-201ENST00000604187 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 NMT2O60551 498 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 NBNO60934 754 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SLC3A2P08195 630 aaKnown RBP13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 TXNP10599 105 aaKnown RBP13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SLC16A2P36021 539 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 GDF6Q6KF10 455 aaPredicted RBP13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 FBXO22Q8NEZ5 403 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 NACAP1Q9BZK3 213 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RANBP17Q9H2T7 1088 aaKnown RBP13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ECHDC1Q9NTX5 307 aa13.93□□□□□ -0.18
PDLIM1P1-201ENST00000604187 WDFY4Q6ZS81 3184 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 COL4A4P53420 1690 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ABHD14A-ACY1A0A1B0GW23 586 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PATL2C9JE40 543 aaKnown RBP13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CXCL10P02778 98 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PPARAQ07869 468 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PUS10Q3MIT2 529 aaKnown RBP13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 NEK9Q8TD19 979 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 C17orf80Q9BSJ5 609 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 LRRCC1Q9C099 1032 aa13.92□□□□□ -0.18
PDLIM1P1-201ENST00000604187 TSPY2A6NKD2 308 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CCER2I3L3R5 266 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ARIH2O95376 493 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ZFYP08048 801 aaPredicted RBP13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 EDNRBP24530 442 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ZP2Q05996 745 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 MKRN4PQ13434 485 aaPredicted RBP13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SYDE2Q5VT97 1194 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 TSHZ3Q63HK5 1081 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 TTBK2Q6IQ55 1244 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RNF207Q6ZRF8 634 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 AFG1LQ8WV93 481 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CLEC4DQ8WXI8 215 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 MRPL38Q96DV4 380 aaKnown RBP13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 NAPBQ9H115 298 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 KCNH6Q9H252 994 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 IL17RBQ9NRM6 502 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ZBTB40Q9NUA8 1239 aa13.91□□□□□ -0.18
PDLIM1P1-201ENST00000604187 POTEB3A0JP26 581 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 EFCAB14O75071 495 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PARNO95453 639 aaKnown RBP13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 MMP3P08254 477 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 CKBP12277 381 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RPS6P62753 249 aaKnown RBP13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 RBL2Q08999 1139 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 IKBKEQ14164 716 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 PTPROQ16827 1216 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 POTEBQ6S5H4 581 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 EP400NLQ6ZTU2 488 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 HFE2Q6ZVN8 426 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 SESTD1Q86VW0 696 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 DCAF4Q8WV16 495 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 ANKS1AQ92625 1134 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 KAT2BQ92831 832 aa13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.9□□□□□ -0.18
PDLIM1P1-201ENST00000604187 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
PDLIM1P1-201ENST00000604187 C7orf31Q8N865 590 aa13.89□□□□□ -0.19
PDLIM1P1-201ENST00000604187 SEC62Q99442 399 aaKnown RBP13.89□□□□□ -0.19
PDLIM1P1-201ENST00000604187 INCENPQ9NQS7 918 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms