RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 CCL15Q16663 113 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 CFAP100Q494V2 611 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 ARSIQ5FYB1 569 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 HERC4Q5GLZ8 1057 aaPredicted RBP3.46□□□□□ -1.86
VCAM1-205ENST00000603679 TMEM184AQ6ZMB5 413 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 MAMSTRQ6ZN01 415 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 KIAA0825Q8IV33 1275 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 SIRT2Q8IXJ6 389 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 RSPH1Q8WYR4 309 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 SAMD11Q96NU1 681 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 ZBED2Q9BTP6 218 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 CNTN3Q9P232 1028 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 POLIQ9UNA4 740 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 TTF2Q9UNY4 1162 aaKnown RBP3.46□□□□□ -1.86
VCAM1-205ENST00000603679 PCDHB11Q9Y5F2 797 aa3.46□□□□□ -1.86
VCAM1-205ENST00000603679 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.46□□□□□ -1.86
VCAM1-205ENST00000603679 COL5A1P20908 1838 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 STRNO43815 780 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 ADAMTS4O75173 837 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 UFL1O94874 794 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 PDGFAP04085 211 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 NBL1P41271 181 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MMP16P51512 607 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 EPHB1P54762 984 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 HMGN5P82970 282 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MFSD4BQ5TF39 518 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 CASC1Q6TDU7 716 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MCM10Q7L590 875 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SH3RF1Q7Z6J0 888 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MB21D1Q8N884 522 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SLC17A8Q8NDX2 589 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 NEK9Q8TD19 979 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 ZNF669Q96BR6 464 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 FAM122AQ96E09 287 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 THAP11Q96EK4 314 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 FAM84BQ96KN1 310 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 PRMT6Q96LA8 375 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 IER2Q9BTL4 223 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SAP130Q9H0E3 1048 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 LMAN2LQ9H0V9 348 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 UNC93B1Q9H1C4 597 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 PLAAQ9Y263 795 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MYH6P13533 1939 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 EIF1AYO14602 144 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 FOXP2O15409 715 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 CPNE3O75131 537 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 CRKP46108 304 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 OAZ1P54368 228 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 EPHA4P54764 986 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MRPS5P82675 430 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 RAB30Q15771 203 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SLC39A5Q6ZMH5 540 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 RPAINQ86UA6 219 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SSH3Q8TE77 659 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SGSM3Q96HU1 749 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 CLMNQ96JQ2 1002 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SPON2Q9BUD6 331 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 GNL3LQ9NVN8 582 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 PDHXO00330 501 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 TNNT1P13805 278 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 SSR1P43307 286 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 TNNT3P45378 269 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 RASGRF1Q13972 1273 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 LRRC26Q2I0M4 334 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 L1TD1Q5T7N2 865 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 NBPF12Q5TAG4 269 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 CC2D1AQ6P1N0 951 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 PCGF5Q86SE9 256 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 ZFPM1Q8IX07 1006 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 CRIPAKQ8N1N5 446 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 OR6P1Q8NGX9 317 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 KHSRPQ92945 711 aaKnown RBP eCLIP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 C2orf49Q9BVC5 232 aaPredicted RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 NT5C1AQ9BXI3 368 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 USP44Q9H0E7 712 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 OSBPL3Q9H4L5 887 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 COPRSQ9NQ92 184 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 RABGAP1Q9Y3P9 1069 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MYH7BA7E2Y1 1941 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 HELZP42694 1942 aaKnown RBP3.45□□□□□ -1.86
VCAM1-205ENST00000603679 MIA3Q5JRA6 1907 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 DENND4CQ5VZ89 1909 aa3.45□□□□□ -1.86
VCAM1-205ENST00000603679 TCRBV5S4A2TA0A5A2 114 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 TMEM229AB2RXF0 380 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 ST18O60284 1047 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 NASPP49321 788 aaPredicted RBP3.44□□□□□ -1.86
VCAM1-205ENST00000603679 GABPAQ06546 454 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 CHRNDQ07001 517 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 PROX2Q3B8N5 592 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 CCDC129Q6ZRS4 1044 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 RELL1Q8IUW5 271 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 DEFB123Q8N688 67 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 MAFAQ8NHW3 353 aaPredicted RBP3.44□□□□□ -1.86
VCAM1-205ENST00000603679 RTF1Q92541 710 aaKnown RBP3.44□□□□□ -1.86
VCAM1-205ENST00000603679 NUDT12Q9BQG2 462 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 KIAA1683Q9H0B3 1180 aa3.44□□□□□ -1.86
VCAM1-205ENST00000603679 RC3H2Q9HBD1 1191 aaKnown RBP3.44□□□□□ -1.86
VCAM1-205ENST00000603679 DDX20Q9UHI6 824 aaKnown RBP3.44□□□□□ -1.86
VCAM1-205ENST00000603679 EMSYQ7Z589 1322 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms